LOCUS       BC055093                 640 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens apolipoprotein C-I, mRNA (cDNA clone MGC:62029
            IMAGE:6567705), complete cds.
ACCESSION   BC055093
VERSION     BC055093.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 640)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: NCI
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 48 Row: j Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, Similarity but not identity to protein.
FEATURES             Location/Qualifiers
     source          1..640
                     /db_xref="H-InvDB:HIT000054109"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:62029 IMAGE:6567705"
                     /tissue_type="Pooled, 40 cell lines"
                     /clone_lib="NIH_MGC_126"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..640
                     /gene="APOC1"
                     /db_xref="GeneID:341"
                     /db_xref="HGNC:HGNC:607"
                     /db_xref="MIM:107710"
     CDS             252..503
                     /gene="APOC1"
                     /codon_start=1
                     /product="apolipoprotein C-I"
                     /protein_id="AAH55093.1"
                     /db_xref="GeneID:341"
                     /db_xref="HGNC:HGNC:607"
                     /db_xref="MIM:107710"
                     /translation="MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTL
                     EDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS"
BASE COUNT          173 a          174 c          171 g          122 t
ORIGIN      
        1 gggggagctc ggctcttgag acaggaatct tgcccattcc ccgaacgaat aaaccccttc
       61 cttaactcag cgtctgagga attttgtctg cggctcctcc tgctacattc tgagtgggga
      121 aagggactaa ggtggtctga ggaccccaca gagtcaggaa gattgagagc ctgataaagg
      181 tcctgcgggc aggacaggac ctcccaacca agccctccag caaggattca gagtgcccct
      241 ccggcctcgc catgaggctc ttcctgtcgc tcccggtcct ggtggtggtt ctgtcgatcg
      301 tcttggaagg cccagcccca gcccagggga ccccagacgt ctccagtgcc ttggataagc
      361 tgaaggagtt tggaaacaca ctggaggaca aggctcggga actcatcagc cgcatcaaac
      421 agagtgaact ttctgccaag atgcgggagt ggttttcaga gacatttcag aaagtgaagg
      481 agaaactcaa gattgactca tgaggacctg aagggtgaca tcccaggagg ggcctctgaa
      541 atttcccaca ccccagcgcc tgtgctgagg actccctcca tgtggcccca ggtgccacca
      601 ataaaaatcc tacgaaaaaa aaaaaaaaaa aaaaaaaaaa
//