LOCUS BC054490 3324 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAP1 GTPase activating protein, mRNA (cDNA clone
MGC:51934 IMAGE:5767775), complete cds.
ACCESSION BC054490
VERSION BC054490.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3324)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3324)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506414.
FEATURES Location/Qualifiers
source 1..3324
/db_xref="H-InvDB:HIT000054068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51934 IMAGE:5767775"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3324
/gene="RAP1GAP"
/gene_synonym="KIAA0474"
/gene_synonym="rap1GAPII"
/db_xref="GeneID:5909"
/db_xref="HGNC:HGNC:9858"
/db_xref="MIM:600278"
CDS 166..2157
/gene="RAP1GAP"
/gene_synonym="KIAA0474"
/gene_synonym="rap1GAPII"
/codon_start=1
/product="RAP1 GTPase activating protein"
/protein_id="AAH54490.1"
/db_xref="GeneID:5909"
/db_xref="HGNC:HGNC:9858"
/db_xref="MIM:600278"
/translation="MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFP
LILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNY
YSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLV
CEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESP
AFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTE
GDAQQLQRKRHIGNDIVAVVFQDENTPLVPDMIASNFLHAYVVVQAEGGGPDGPLYKV
SVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAA
LLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK
KPNTVSTSHSGSFAPNNPDLAKAAGISLIVPGKSPTRKKSGPFGSRRSSAIGIENIQE
VQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFS
RSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGS
SPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQLGC"
BASE COUNT 792 a 985 c 932 g 615 t
ORIGIN
1 ttcggggcct acggcggggt ggacaagtcc ttcacttctc gccggagtgt gtggaggagc
61 gatgggcaga accagcactt ccctcaggca ctagacctgt cacgagtgaa cttagttccc
121 tcctatactc cttcactcta ccctaagaac acagatctat ttgagatgat tgagaagatg
181 cagggaagca ggatggatga acaacgctgc tccttcccgc cgcccctcaa aacagaggag
241 gactacattc catacccgag cgtgcacgag gtcttggggc gagaaggacc cttccccctc
301 atcctgctgc cccagtttgg gggctactgg attgagggca ccaaccacga aatcaccagc
361 atccccgaga cagagccact gcagtcgccc acaaccaagg tgaagctcga gtgcaacccc
421 acagcccgca tctaccggaa gcactttctc ggcaaggagc atttcaatta ctactcactg
481 gacgctgccc tcggccacct tgtcttctca ctcaagtacg atgtcatcgg ggaccaagag
541 cacctgcggc tgctgctcag gaccaagtgc cggacatacc atgatgtcat ccccatctcc
601 tgcctcaccg agttccctaa tgttgtccag atggcaaagt tggtgtgtga agacgtcaat
661 gtggatcggt tctatcctgt gctctacccc aaggcttccc ggctcatcgt cacctttgac
721 gagcatgtca tcagcaataa cttcaagttt ggcgtcattt atcagaagct tgggcagacc
781 tccgaggaag aactcttcag caccaatgag gaaagtcccg ctttcgtgga gttccttgaa
841 tttcttggcc agaaggtcaa actgcaggac tttaaggggt tccgaggagg cctggacgtg
901 acccacgggc agacggggac cgaatctgtg tactgcaact tccgcaacaa ggagatcatg
961 tttcacgtgt ccaccaagct gccatacacg gaaggggacg cccagcagtt gcagcggaag
1021 cggcacatcg ggaacgacat cgtggctgtg gtcttccagg atgagaacac tcctctcgtg
1081 cccgacatga tcgcgtccaa cttcctgcat gcctacgtcg tggtgcaggc tgagggcggg
1141 ggccctgatg gccccctcta caaggtctct gtcactgcaa gagatgatgt gcccttcttt
1201 ggaccccccc tcccggaccc cgctgtgttc aggaaggggc ctgagttcca ggaatttttg
1261 ctgacaaagc tgatcaatgc tgaatatgcc tgctacaagg cagagaagtt tgccaaactg
1321 gaggagcgga cgcgggccgc cctcctggag acgctctatg aggaactaca catccacagc
1381 cagtccatga tgggcttggg cggcgacgag gacaagatgg agaatggcag tgggggcggc
1441 ggcttctttg agtctttcaa gcgggtcatc cggagccgca gccagtccat ggatgccatg
1501 gggctgagca acaagaagcc caacaccgtg tccaccagcc acagcgggag cttcgcgccc
1561 aacaaccccg acctggccaa ggcggctgga atatcactga ttgtccctgg gaagagcccc
1621 acgaggaaga agtcgggccc gttcggctcc cgccgcagca gcgccattgg catcgagaac
1681 atacaggagg tgcaggagaa gagggagagc cctccggctg gtcagaagac cccagacagc
1741 gggcacgtct cacaggagcc caagtcggag aactcatcca ctcagagctc cccagagatg
1801 cccacgacca agaacagagc ggagaccgca gcgcagagag cagaggcgct caaggacttc
1861 tcccgctcct cgtccagtgc cagcagcttc gccagcgtgg tggaggagac ggagggtgtg
1921 gacggagagg acacaggcct ggagagcgtg tcatcctcag gaacacccca caagcgggac
1981 tccttcatct atagcacgtg gctggaggac agtgtcagca ccactagtgg gggcagctcc
2041 ccaggcccct ctcgatcacc ccacccagac gccggcaagt tgggggaccc tgcgtgtccc
2101 gagatcaaga tccagctgga agcatctgag cagcacatgc cccagctggg ctgttagccg
2161 ggccaccccc tctgaaggtg aaactgagca gatgaggcca cagaagcaca aggggaaggt
2221 gccgtgtcaa gcccaggcag acgagacctc tgccctgaag accaacacca gcccgtgggc
2281 tgccccctgc ctccccaccc tccccatggc ccacccatct gggctgtctc tgcagggcag
2341 agccgtccag acctgggatc agggaagctg ctggcatcgt ccccaccccc agcctggggg
2401 tctgggctgg ggcagggatt gctcagtgga agcaggactg ggggtctggc ttgccccctc
2461 cctgggcctc catcacccct gagcatccct ctggactcag agggaacaag gtgggagaga
2521 gagtttgaga cagctccgtg tggagagctt agcccctgga ggcagcacaa ggaggatgtg
2581 atatgtgggg gagtgagcac tgggttggga gccgggtcct ggtttccaat ttgggttctg
2641 ctgtgtgact ctgggcaagt cactctccct ctctgggcat gtctgctaca aatggacaag
2701 attatttcag aggtcactga agactgtgat tacatgcacc tgccttagaa ggtaggattt
2761 tcttcccagg gacctcctat caccctaccc tgcttcttga ggtccctgga gccccaggtg
2821 ggctgagggg cagggagccg gctgtgccca gtatgcctcc tggaccctcc agttctgcca
2881 caggtctgcc gatgccctgt ccactgccta cacatgacag acaagtaacc ccctcatggg
2941 ggatggggac ctacctggct cctcagccag cacccagctt aacccctgcc atcccatgct
3001 gggccctcca ggccaagagt ctcagctggc cgagagtcca ggccttgcct cccccgaccg
3061 ccatggaggg ggcagcccgg cacagctgct gggagccctt gtgtgtctgg tcacactttt
3121 taggcgtcac gccaaaggcc agcctcctgg ccccaatacc cattttggaa gcccctgtgg
3181 ccgtgtggat gtcggtaaca gttgtataaa ataaattcta tttatcgcta ttgtaaaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaaa aaaaaaaaaa aaaa
//