LOCUS BC054027 1555 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin related protein 2/3 complex, subunit 1A, 41kDa,
mRNA (cDNA clone MGC:64823 IMAGE:6514889), complete cds.
ACCESSION BC054027
VERSION BC054027.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1555)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907051.
FEATURES Location/Qualifiers
source 1..1555
/db_xref="H-InvDB:HIT000054052"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64823 IMAGE:6514889"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1555
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
CDS 94..1206
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/codon_start=1
/product="actin related protein 2/3 complex, subunit 1A,
41kDa"
/protein_id="AAH54027.1"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
/translation="MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVK
AHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFV
KWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAG
SCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSR
LAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDD
RGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYE
VDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM"
BASE COUNT 416 a 375 c 386 g 378 t
ORIGIN
1 gcgtcgactg cccagagtcc gcgaatcctc cgctccgagc ccgtccggac tcccccgatc
61 ccagctttct ctcctttgaa aacactaaga ataatgtcac tgcatcagtt tttactagag
121 ccaatcacct gtcatgcctg gaacagggat cgtactcaga ttgccctcag tcccaataat
181 cacgaagtgc acatctataa gaagaacggg agccagtggg tgaaagctca tgaactcaag
241 gagcacaacg gacacatcac aggtattgac tgggctccca agagcgaccg cattgtcact
301 tgtggggcag accgcaatgc ctatgtctgg agtcagaaag atggtgtttg gaagccaacc
361 ctggtgatcc tgagaattaa tcgcgcagct acttttgtga agtggtcccc cctagagaac
421 aaatttgctg tgggaagtgg agcacgactc atttctgttt gttactttga gtctgaaaat
481 gactggtggg tgagcaagca cattaaaaag ccgattcgct ccacagtcct cagcttggat
541 tggcatccca acaacgtttt gctggcagca ggatcatgtg acttcaaatg cagagtgttt
601 tctgcctaca ttaaagaagt ggatgaaaag ccagccagca cgccctgggg cagcaagatg
661 ccttttgggc agctgatgtc agagtttggt ggcagtggca ctggtggctg ggtccacggg
721 gtaagcttct ctgccagtgg gagccgcctg gcctgggtca gccacgacag caccgtgtct
781 gttgctgatg cctcaaaaag tgtgcaggtc tcgactctga agacagagtt cctgccgctc
841 ctaagtgtgt catttgtctc agagaacagc gtcgtggctg ctggccatga ctgctgccca
901 atgctcttta actacgatga ccgcggctgc ctgaccttcg tctccaagtt agatattcca
961 aaacagagca tccaacgcaa catgtctgcc atggaacgct tccgcaacat ggacaagaga
1021 gccacaactg aggaccgcaa cacggccttg gagacgctgc accagaatag catcactcaa
1081 gtctctattt atgaggtgga caagcaagat tgtcgcaaat tttgcactac tggcatcgat
1141 ggagccatga caatttggga tttcaagacc ctcgagtctt ccatccaggg cctccggata
1201 atgtgaagct gagtgagcct ccgccatcca gcatgacaaa ctgtggccga ccgcagctgt
1261 gccgtggcac gatggcgagg aagccagccc caaggaaaca ctgaaaacac atatcacgcc
1321 aatgccgtgt ggttttgttt gaatataaaa ttggtgaaag tgttggtttt tttaaggcag
1381 taattttttt gtttgttttt ttgcgatttc attccattct tgaccaaagc ttctctttaa
1441 gtagtttatt atggaaaatt gtcacactaa cttaaaagac agggtgaggg agatatgtaa
1501 attgtccact agaaaattaa ataaaagaac tgaatgtgga aaaaaaaaaa aaaaa
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