LOCUS BC053855 4792 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4, mRNA (cDNA clone MGC:61482 IMAGE:5588610),
complete cds.
ACCESSION BC053855
VERSION BC053855.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4792)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4792)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595561.
FEATURES Location/Qualifiers
source 1..4792
/db_xref="H-InvDB:HIT000053993"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61482 IMAGE:5588610"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4792
/gene="NFATC4"
/gene_synonym="NF-ATc4"
/gene_synonym="NFAT3"
/db_xref="GeneID:4776"
/db_xref="HGNC:HGNC:7778"
/db_xref="MIM:602699"
CDS 138..2846
/gene="NFATC4"
/gene_synonym="NF-ATc4"
/gene_synonym="NFAT3"
/codon_start=1
/product="nuclear factor of activated T-cells,
cytoplasmic, calcineurin-dependent 4"
/protein_id="AAH53855.1"
/db_xref="GeneID:4776"
/db_xref="HGNC:HGNC:7778"
/db_xref="MIM:602699"
/translation="MGAASCEDEELEFKLVFGEEKEAPPLGAGGLGEELDSEDAPPCC
RLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGGPGGGA
GGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYREAGG
QGGGAFFSPSPGSSSLSSWSFFSDASDEAALYAACDEVESELNEAASRFGLGSPLPSP
RASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPRPASPCGKRRYSSSGT
PSSASPALSRRGSLGEEGSEPPPPPPLPLARDPGSPGPFDYVGAPPAESIPQKTRRTS
SEQAVALPRSEEPASCNGKLPLGAEESVAPPGGSRKEVAGMDYLAVPSPLAWSKARIG
GHSPIFRTSALPPLDWPLPSQYEQLELRIEVQPRAHHRAHYETEGSRGAVKAAPGGHP
VVKLLGYSEKPLTLQMFIGTADERNLRPHAFYQVHRITGKMVATASYEAVVSGTKVLE
MTLLPENNMAANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQGGGKVV
SVQAASVPIECSQRSAQELPQVEAYSPSACSVRGGEELVLTGSNFLPDSKVVFIERGP
DGKLQWEEEATVNRLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNGRRKRSPTQSFR
FLPVICKEEPLPDSSLRGFPSASATPFGTDMDFSPPRPPYPSYPHEDPACETPYLSEG
FGYGMPPLYPQTGPPPSYRPGLRMFPETRGTTGCAQPPAVSFLPRPFPSDPYGGRGSS
FSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDVHPLPAEGYNKVGPGYGPGEGAPEQ
EKSRGGYSSGFRDSVPIQGITLEEVSEIIGRDLSGFPAPPGEEPPA"
BASE COUNT 996 a 1424 c 1404 g 968 t
ORIGIN
1 ctggagggag gcggcagcga cggaggaggg ggcttctcag agaaagggag ggagggagcc
61 acccgggtga agatacagca gcctcctgaa ctcccccctc ccacccaggc cgggacctgg
121 gggctcctgc cggatccatg ggggcggcca gctgcgagga tgaggagctg gaatttaagc
181 tggtgttcgg ggaggaaaag gaggcccccc cgctgggcgc ggggggattg ggggaagaac
241 tggactcaga ggatgccccg ccatgctgcc gtctggcctt gggagagccc cctccctatg
301 gcgctgcacc tatcggtatt ccccgacctc caccccctcg gcctggcatg cattcgccac
361 cgccgcgacc agccccctca cctggcacct gggagagcca gcccgccagg tcggtgaggc
421 tgggaggacc aggagggggt gctgggggtg ctgggggtgg ccgtgttctc gagtgtccca
481 gcatccgcat cacctccatc tctcccacgc cggagccgcc agcagcgctg gaggacaacc
541 ctgatgcctg gggggacggc tctcctagag attacccccc accagaaggc tttgggggct
601 acagagaagc agggggccag ggtggggggg ccttcttcag cccaagccct ggcagcagca
661 gcctgtcctc gtggagcttc ttctccgatg cctctgatga ggcagccctg tatgcagcct
721 gcgacgaggt ggagtctgag ctaaatgagg cggcctcccg ctttggcctg ggctccccgc
781 tgccctcgcc ccgggcctcc cctcggccat ggacccccga agatccctgg agcctgtatg
841 gtccaagccc cggaggccga gggccagagg atagctggct actcctcagt gctcctgggc
901 ccaccccagc ctccccgcgg cctgcctctc catgtggcaa gcggcgctat tccagctcgg
961 gaaccccatc ttcagcctcc ccagctctgt cccgccgtgg cagcctgggg gaagaggggt
1021 ctgagccacc tccaccaccc ccattgcctc tggcccggga cccgggctcc cctggtccct
1081 ttgactatgt gggggcccca ccagctgaga gcatccctca gaagacacgg cggacttcca
1141 gcgagcaggc agtggctctg cctcggtctg aggagcctgc ctcatgcaat gggaagctgc
1201 ccttgggagc agaggagtct gtggctcctc caggaggttc ccggaaggag gtggctggca
1261 tggactacct ggcagtgccc tccccactcg cttggtccaa ggcccggatt gggggacaca
1321 gccctatctt caggacctct gccctacccc cactggactg gcctctgccc agccaatatg
1381 agcagctgga gctgaggatc gaggtacagc ctagagccca ccaccgggcc cactatgaga
1441 cagaaggcag ccgtggagct gtcaaagctg cccctggcgg tcaccccgta gtcaagctcc
1501 taggctacag tgagaagcca ctgaccctac agatgttcat cggcactgca gatgaaagga
1561 acctgcggcc tcatgccttc tatcaggtgc accgtatcac aggcaagatg gtggccacgg
1621 ccagctatga agccgtagtc agtggcacca aggtgttgga gatgactctg ctgcctgaga
1681 acaacatggc ggccaacatt gactgcgcgg gaatcctgaa gcttcggaat tcagacattg
1741 agcttcggaa gggtgagacg gacatcgggc gcaaaaacac acgtgtacgg ctggtgttcc
1801 gggtacacgt gccccagggc ggcgggaagg tcgtctcagt acaggcagca tcggtgccca
1861 tcgagtgctc ccagcgctca gcccaggagc tgccccaggt ggaggcctac agccccagtg
1921 cctgctctgt gagaggaggc gaggaactgg tactgactgg ctccaacttc ctgccagact
1981 ccaaggtggt gttcattgag aggggtcctg atgggaagct gcaatgggag gaggaggcca
2041 cagtgaaccg actgcagagc aacgaggtga cgctgaccct gactgtcccc gagtacagca
2101 acaagagggt ttcccggcca gtccaggtct acttttatgt ctccaatggg cggaggaaac
2161 gcagtcctac ccagagtttc aggtttctgc ctgtgatctg caaagaggag cccctaccgg
2221 actcatctct gcggggtttc ccttcagcat cggcaacccc ctttggcact gacatggact
2281 tctcaccacc caggcccccc tacccctcct atccccatga agaccctgct tgcgaaactc
2341 cttacctatc agaaggcttc ggctatggca tgccccctct gtacccccag acggggcccc
2401 caccatccta cagaccgggc ctgcggatgt tccctgagac taggggtacc acaggttgtg
2461 cccaaccacc tgcagtttcc ttccttcccc gccccttccc tagtgacccg tatggagggc
2521 ggggctcctc tttctccctg gggctgccat tctctccgcc agcccccttt cggccgcctc
2581 ctcttcctgc atccccaccg cttgaaggcc ccttcccttc ccagagtgat gtgcatcccc
2641 tacctgctga gggatacaat aaggtagggc caggctatgg ccctggggag ggggctccgg
2701 agcaggagaa atccaggggt ggctacagca gcggcttccg agacagtgtc cctatccagg
2761 gtatcacgct ggaggaagtg agtgagatca ttggccgaga cctgagtggc ttccctgcac
2821 ctcctggaga agagcctcct gcctgaacca cgtgaactgt catcacctgg caaccccagc
2881 cccagcctca gcccttcccc ctttccctcc ttcctggagt ggtggctaca gaagcttggg
2941 gccaacccta gctcctcttt ccccagcttc tgtctgtctc actgtcttcc ctcccctccc
3001 ccagctgagg tgtggccctc aggcctggtg ctgccttgga gggctggggg aaggagtgtg
3061 tggaggaggg aggagggtga agactgaggc taggtgccag aatggactgg agtgaaggcg
3121 tgtctagagt gtgggctggc tgttgtgctg gaaagctggg gacaggttga tggtaataaa
3181 ctgctcaatg accagtgctt caggctccag agctctttgg agagatgggt tggggcagct
3241 tactccagcc ctggcccaag gaggcccaga agttggaaag agatggaatg tggctgggaa
3301 cattgcatcc caaagagctt ctcagtggag gaggctgggg aaggcatgag ggggctcaga
3361 ggctccttga ctgggaccag gattgggggc cagggcttga gtaggcctct ccactctcct
3421 ccttgggggt ccagattcct taggagcttt gggatgaggc ccaggaggct gcatttttcc
3481 aggtccttag tcttgccacc acacagatga ttctgattca tagccaagat gaggacacac
3541 tgatgtagct gatctctcat ttacagagga ggattctaaa gttcagagag ggaaaggggc
3601 ttgcctgagg tcacgtagat aatcagcagc acattgaacg ctgcactcct gggctcctgt
3661 ccccagcccc cattcagaca cgctgactca ggaggtccag gcctctaagg cttctctccc
3721 tggagtgagg gtggaggtga gggagagctg gcacaagccc tccctctgga tcctccactc
3781 ctggggatta tgaagatatt ctggaaagat ttgtgcttca gaggtagact gcagaaagca
3841 aacagtctac ccagcagctc tgaatgtcac ctgccctggg gcttacagca ctatatgagt
3901 tcctggccta tcctgcaaat atgcccatgc tggccttcta aatagctggt acatccatca
3961 ccactgacgg gcctggcctg gaaacctggt ttgtcccctg tcttgatggc ctacgagagg
4021 ccaagttcca ctgggctggg aaaagtcact ttgtctgtct tgttcacctg gagcctgaca
4081 caccgtaggt actgagtaca aatagcttga tttggctagg cttggctgca gggggacgtg
4141 cctaaaagac attccgggca tttgcacttg ggaaacttgc ctcaccttca ggcttgtggg
4201 gcctctctat gcccagtgag tccaggcagt cctagcaagt actcaggaga gcaggggtgg
4261 gtgtgacaga ggctggctct ggattggggg acaacagaac cagagtaact cctcgcctgt
4321 tgctgctttg caatgaattt cctttacctt tctggaacac aagctgctgt gaaccaaact
4381 gatatcaagt gattagctca ccgggccttg gttgcttttc aaagatcccc ttcagccccc
4441 tgccagagtc actgccccat aatcaccatg tcagaaggga ccctagggca ttcgtgtcct
4501 atttatcaat cttcagcacc acctctaaga tctctgagag agggtggatc agcctctgtg
4561 taaacaaaaa gctgttagga cttgttgcct ctcaaggtgg actattctgt tttctgccag
4621 gacactgcca ttcatgcatt gtcagatatt tattaaacag cagcaaagtg ccagccaatt
4681 tgtcctggag gaattcatag cctcatgggg caaaagtaaa taaacagctt attacaattc
4741 aacaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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