LOCUS BC053668 1728 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat (in FLII) interacting protein 2,
mRNA (cDNA clone MGC:61455 IMAGE:6146978), complete cds.
ACCESSION BC053668
VERSION BC053668.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453725.
FEATURES Location/Qualifiers
source 1..1728
/db_xref="H-InvDB:HIT000053970"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61455 IMAGE:6146978"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1728
/gene="LRRFIP2"
/gene_synonym="FLJ20248"
/gene_synonym="HUFI-2"
/db_xref="GeneID:9209"
/db_xref="HGNC:HGNC:6703"
CDS 381..1583
/gene="LRRFIP2"
/gene_synonym="FLJ20248"
/gene_synonym="HUFI-2"
/codon_start=1
/product="leucine rich repeat (in FLII) interacting
protein 2"
/protein_id="AAH53668.1"
/db_xref="GeneID:9209"
/db_xref="HGNC:HGNC:6703"
/translation="MGTPASGRKRTPVKDRFSAEDEALSNIAREAEARLAAKRAARAE
ARDIRMRELERQQKELDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSL
IDPDTSLSELRESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAE
FYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEKHGLVIIPDGTPNGDVS
HEPVAGAITVVSQEAAQVLESAGEGPLDVRLRKLAGEKEELLSQIRKLKLQLEEERQK
CSRNDGTVGDLAGLQNGSDLQFIEMQRDANRQISEYKFKLSKAEQDITTLEQSISRLE
GQVLRYKTAAENAEKVEDELKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKAN
RTALLAQQ"
BASE COUNT 558 a 375 c 462 g 333 t
ORIGIN
1 ggccgctcag gctgcggctc ctcccggggc cggttcccgc tgtctcagcc gcggcgcaga
61 gggcacatcg gcctgaccga ctagccggct gccagtgccg ggagccgccg cgtccatccc
121 cgcccgcctg gccggggacc caggactgag tcgtccagct gcgcccctcg cccatagccc
181 cagcggtcgc cgggcgggcg agcagctctt cggcccttcc cggacagcga cgcagtcgca
241 gcgcgcgccc taacacagat gtgggaagat aaatgaaggg gtctagatgt aaatgtcagt
301 ggaaaggaga gctaccatca ctaagggctg aaaacacagt taaatcactt tcaaagttaa
361 aagactatta agaacacaag atggggactc ctgcttctgg aaggaaaaga acacctgtga
421 aagaccgatt ttctgcagaa gatgaagctt tgagtaacat tgccagagag gcagaggcaa
481 ggctggcagc aaaacgggct gcccgggcag aagcaagaga tatacgcatg agagaactgg
541 aacgacaaca aaaagagttg gatgaaaaat ctgacaaaca gtatgctgaa aattatacaa
601 gaccttcatc tcgaaattct gcctcagcaa caacccctct aagtggaaac tcatccagac
661 gaggaagtgg ggacaccagc agcttaatag atccagacac ttcattaagt gaattgcggg
721 aatctttgtc tgaagtggaa gaaaaataca agaaagccat ggtttccaat gcacagttag
781 acaatgagaa gaacaatttg atctaccaag tagacacact caaggatgtt attgaagagc
841 aggaggaaca gatggcagaa ttttatagag aaaatgaaga aaaatcaaag gagttagaaa
901 ggcagaaaca tatgtgtagt gtgctgcagc ataagatgga agaacttaaa gaaggcctgc
961 ggcaaagaga tgagcttatt gagaaacatg gcttagttat aatccccgat ggcactccca
1021 atggtgatgt cagtcatgaa ccagtggctg gagccatcac tgttgtgtct caggaagctg
1081 ctcaggtctt ggagtcagca ggagaagggc cattagatgt aaggctacga aaacttgctg
1141 gagagaagga agaactactg tcacagatta gaaaactgaa gcttcagtta gaggaggaac
1201 gacagaaatg ctccaggaat gatggcacag tgggtgacct ggcaggactg cagaatggct
1261 cagacttgca gttcatcgaa atgcagagag atgccaatag acaaattagc gaatacaaat
1321 ttaagctttc aaaagcagaa caggatataa ctaccttgga gcaaagtatt agccggcttg
1381 agggacaggt tctgagatat aaaactgctg ctgagaatgc tgagaaagtt gaagatgaat
1441 tgaaagcaga aaaacggaag ctacaacgag agttacgaac agcactggac aagattgagg
1501 agatggagat gaccaacagc cacctggcca agcggctgga gaagatgaag gccaatagga
1561 cagcacttct ggcccagcag taggaaaacc acccttcaac ctgggtgatg ctccttgggg
1621 ccctacctag agggactgac ttttgtccat tgacacaaac cccttttagt actgttttga
1681 gttttgtcat taaaacagcc acctttgtat tttaaaaaaa aaaaaaaa
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