LOCUS BC053653 2185 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 2, mRNA (cDNA clone
IMAGE:5759939), with apparent retained intron.
ACCESSION BC053653
VERSION BC053653.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2185)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2185)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: h Column: 5
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2185
/db_xref="H-InvDB:HIT000259331"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5759939"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 590 a 533 c 486 g 576 t
ORIGIN
1 gggccacagg cagctccttg ccagctctcc tcctcgcaca gccgctcgaa ccgcctgctg
61 agccccatgg cccgcgccac gctctccgcc gcccccagca atccccggct cctgcgggtg
121 gcgctgctgc tcctgctcct ggtggccgcc agccggcgcg cagcaggtgg gtcccggcgc
181 cctggggtcc ccgggccgga cgcggctggg gtgggcgccc cgcgccgaca gccccgctca
241 atcagcgagt ctcttcttcc ctaggagcgc ccctggccac tgaactgcgc tgccagtgct
301 tgcagaccct gcagggaatt cacctcaaga acatccaaag tgtgaaggtg aagtcccccg
361 gaccccactg cgcccaaacc gaagtcatgt aagtctcgcc catcgctgcc gctgccactg
421 ctggggtccc cgactctccc gctgccccaa accctgtcct cagcccgacc tcctgtctca
481 cgagattccc ttctctctgc agagccacac tcaagaatgg gcagaaagct tgtctcaacc
541 ccgcatcgcc catggttaag aaaatcatcg aaaagatgct gaaaaagtaa gttataattt
601 ccatgtacac aggcgactgg agctgttggt cagaaatact ggcgtctgcc ccctaaaaag
661 taaatcagga aaacccaggg ttagctgcag gactgaaaaa attattattt tcacaaagtt
721 gccattaagg ttattaatct gttctggtgc cagaggatat tcccagtgcc cagggtcacc
781 acccaggttc ttccctcctg ccagtgaatg taggtaaaac tgctttcatg taaggtctca
841 ttggagtttg ccagttgtgc tgaagtgttt tccacctgtt aaaaaacaca agcttcattt
901 cccctagttc ctactgactt tcagacctga aaagcagacc ccctggtttt ttgtaaaagt
961 ttagggttga agtgcagaga tttcacaata atattgcact gggtatataa ctggttgcca
1021 ccacctatta gccatgtcac tcagagacaa tattatttag tttatctgag actcagcaaa
1081 acagggaaaa taatggtagc tacatcatga ggttgctttg aggctcaagt gaggcccagt
1141 atgacaaaga gcaataggct ctggctgttt tagccagtaa aacagtgtag actgccactc
1201 ctccacccca cgtcaccccc attcctaaaa gagcatccca agcctagagg tccttgccac
1261 acagcacagc tgtcacaggc agtacccact tgggtgccag gctggggaaa ctgcattcag
1321 aaaactctag agcctgggga aacaggacag gagaagactg ttgtgcagtc agctttcctg
1381 agcacctact cagggcaccc attttctcat tacagtggca aatccaactg accagaagga
1441 aggaggaagc ttattggtgg ctgttcctga aggaggccct gcccttacag gaacagaaga
1501 ggaaagagag acacagctgc agaggccacc tggattgcgc ctaatgtgtt tgagcatcac
1561 ttaggagaag tcttctattt atttatttat ttatttattt atttgtttgt tttagaagat
1621 tctatgttaa tattttatgt gtaaaataag gttatgattg aatctacttg cacactctcc
1681 cattatattt attgtttatt ttaggtcaaa cccaagttag ttcaatcctg attcatattt
1741 aatttgaaga tagaaggttt gcagatattc tctagtcatt tgttaatatt tcttcgtgat
1801 gacatatcac atgtcagcca ctgtgataga ggctgaggaa tccaagaaaa tggccagtaa
1861 gatcaatgtg acggcaggga aatgtatgtg tgtctatttt gtaactgtaa agatgaatgt
1921 cagttgttat ttattgaaat gatttcacag tgtgtggtca acatttctca tgttgaagct
1981 ttaagaacta aaatgttcta aatatccctt ggacatttta tgtctttctt gtaaggcata
2041 ctgccttgtt taatgttaat tatgcagtgt ttccctctgt gttagagcag agaggtttcg
2101 atatttattg atgttttcac aaagaacagg aaaataaaat atttaaaaat ataaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaa
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