LOCUS BC053645 1875 bp mRNA linear HUM 29-OCT-2007
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2C binding protein, mRNA
(cDNA clone IMAGE:5212636), partial cds.
ACCESSION BC053645
VERSION BC053645.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: d Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734396.
FEATURES Location/Qualifiers
source 1..1875
/db_xref="H-InvDB:HIT000259329"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5212636"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1875
/gene="UBE2CBP"
/gene_synonym="DKFZp434A1520"
/gene_synonym="H10BH"
/gene_synonym="YJR141W"
/db_xref="GeneID:90025"
/db_xref="HGNC:HGNC:21381"
CDS <1..1283
/gene="UBE2CBP"
/gene_synonym="DKFZp434A1520"
/gene_synonym="H10BH"
/gene_synonym="YJR141W"
/codon_start=3
/product="UBE2CBP protein"
/protein_id="AAH53645.1"
/db_xref="GeneID:90025"
/db_xref="HGNC:HGNC:21381"
/translation="AAAGLPLVGPHVEPLLVLLTRAPRNLQLGPVWDWKPAMAASAAE
TRVFLEVRGQLQSALLILGEPKEGGMPMNISIMPSSLQMKTPEGCTEIQLPAEVRLVP
SSCRGLQFVVGDGLHLRLQTQAKLGTKLISMFNQSSQTQECCTFYCQSCGEVIIKDRK
LLRVLPLPSENWGALVGEWCCHPDPFANKSLHPQENDCFIGDSFFLVNLRTSLWQQRP
ELSPVEMCCVSSDNHCKLEPKANTKVICKRCKVMLGETVSSETTKFYMTEIIIQSSER
SFPIIPRSWFVQSVIAQCLVQLSSARSTFRFTIQGQDDKVYILLWLLNSDSLVIESLR
NSKYIKKFPLLENTFKADSSSAWSAVKVLYQPCIKSRNEKLVSLWESDISVHPLTLPS
ATCLELLLILSKSNANLPSSLRRVNSFQVAFLKM"
BASE COUNT 549 a 395 c 433 g 498 t
ORIGIN
1 gcgccgcagc ggggctgccg ctggttggtc cgcacgtgga acctctcctg gtcctgttga
61 cccgggcccc tcggaacctc cagcttggtc cggtctggga ctggaagcct gccatggcgg
121 cttctgcggc ggagacgcgc gtgtttctgg aggtgcgggg acagctgcag agcgcgcttc
181 tgatcctggg agaaccgaaa gaaggaggta tgcccatgaa tatttccata atgccatctt
241 cactccagat gaaaacccct gaaggctgca cagaaatcca gcttccagca gaggtcaggc
301 ttgtaccttc ctcttgccgt gggctacagt ttgttgttgg agatggactg cacctgcgac
361 tgcagacgca agcaaaatta ggcacaaaac tgatttcaat gtttaatcaa agctcgcaaa
421 cccaagaatg ttgcacgttt tattgccaat cctgcggtga agtcataata aaagacagga
481 agctcctcag ggtgctccca ctgccgagtg agaactgggg agctctagtt ggagaatggt
541 gttgtcatcc tgaccccttt gctaataaat cacttcatcc gcaagagaat gactgtttta
601 ttggagactc tttcttcttg gtgaatttaa gaaccagttt gtggcagcaa agacctgaac
661 tatccccagt ggagatgtgc tgtgtttctt ctgacaacca ttgtaaattg gaaccaaagg
721 caaataccaa agtaatttgt aagcgttgca aggtaatgtt gggagagacc gtgtcatcag
781 aaaccaccaa gttttatatg acagagataa ttattcagtc atctgagagg agttttccta
841 tcataccaag gtcttggttt gtccagagcg tgatcgccca gtgtctggtg cagctctcct
901 ctgctagaag cacttttaga ttcacgattc aaggtcagga tgacaaagtg tatatcttgc
961 tatggctttt aaattcagac agtttggtga ttgaatcttt gagaaattcc aaatatatca
1021 aaaaattccc cttgttggaa aacacattca aagccgattc tagttctgcc tggagtgctg
1081 tcaaggtcct ctaccagcca tgcatcaaaa gcaggaatga aaaacttgtc agcttgtggg
1141 aaagtgacat cagcgtccac ccgctaaccc tgccctctgc aacctgcttg gagctgctgt
1201 tgatattgtc aaagagtaat gccaatctgc cttcatccct tcgccgtgtg aattcctttc
1261 aggtggcctt tttgaagatg taactattag agctgggcat tctcctcccc cggcagacag
1321 ctctcaagca ggagcacacc gaggccagca gtcagctcag gaggcatcaa ttacaaagac
1381 aagaaccaga gctatgggat aagagcattg cattgaagtt ttaagtttac ttgtttgcat
1441 atattctcta agagaagagt taactttaga tctttgaaaa cccaggactg tgaagaaagt
1501 catagtagca ggttgaggca agtgtagaag ttacatctct atttcccaca gagaggaata
1561 ttcacatatg tgcagtgtca gcaccacctg gaaggttatt acctaatgga gatccatctg
1621 tcctgtgtgg aatccagtga ggaattttat tggtggaact gaatgttaac cgctgtaaat
1681 cctaggaaat aaacttttaa agagtttctc aggatgattt aaaacaaatt ttaaaaaaga
1741 aaagtagaaa acattttata ctttattcag aggagatgct caatagatgt ttgttgaatg
1801 aatgattatc aaattaaagg atttcctatt tatgcaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaa
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