LOCUS BC053610 5430 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein kinase, AMP-activated, beta 2 non-catalytic
subunit, mRNA (cDNA clone MGC:61468 IMAGE:6091476), complete cds.
ACCESSION BC053610
VERSION BC053610.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5430)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5430)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46877069.
FEATURES Location/Qualifiers
source 1..5430
/db_xref="H-InvDB:HIT000053939"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61468 IMAGE:6091476"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5430
/gene="PRKAB2"
/gene_synonym="MGC61468"
/db_xref="GeneID:5565"
/db_xref="HGNC:HGNC:9379"
/db_xref="MIM:602741"
CDS 140..958
/gene="PRKAB2"
/gene_synonym="MGC61468"
/codon_start=1
/product="protein kinase, AMP-activated, beta 2
non-catalytic subunit"
/protein_id="AAH53610.1"
/db_xref="GeneID:5565"
/db_xref="HGNC:HGNC:9379"
/db_xref="MIM:602741"
/translation="MGNTTSDRVSGERHGAKAARSEGAGGHAPGKEHKIMVGSTDDPS
VFSLPDSKLPGDKEFVSWQQDLEDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTK
IPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVKKSDF
EVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEERFKSPPILPPHLLQVILN
KDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKKYVTTLLYKPI"
BASE COUNT 1516 a 1084 c 1161 g 1669 t
ORIGIN
1 aatcgctggt cgccagcgag gggtgcggct tcaatttcaa taactttatt ggtggcctga
61 tctgcagaac agccatcaca tcagtggccc ttggaggagg gagcgcatcg cccgaggtgg
121 tccccgacga gctgcagcca tgggaaacac caccagcgac cgggtgtccg gggagcgcca
181 cggcgccaag gctgcacgct ccgagggcgc aggcggccat gccccgggga aggagcacaa
241 gatcatggtg gggagtacgg acgaccccag cgtgttcagc ctccctgact ccaagctccc
301 tggggacaaa gagtttgtat catggcagca ggatttggag gactccgtaa agcccacaca
361 gcaggcccgg cccactgtta tccgctggtc tgaaggaggc aaggaggtct tcatctctgg
421 gtccttcaac aattggagca ccaagattcc actgattaag agccataatg actttgttgc
481 catcctggac ctccctgagg gagagcacca atacaagttc tttgtggatg gacagtgggt
541 tcatgatcca tcagagcctg tggttaccag tcagcttggc acaattaaca atttgatcca
601 tgtcaagaaa tctgattttg aggtgttcga tgctttaaag ttagattcta tggaaagttc
661 tgagacatct tgtagagacc tttccagctc acccccaggg ccttatggtc aagaaatgta
721 tgcgtttcga tctgaggaaa gattcaaatc cccacccatc cttcctcctc atctacttca
781 agttattctt aacaaagaca ctaatatttc ttgtgaccca gccttactcc ctgagcccaa
841 ccatgttatg ctgaaccatc tctatgcatt gtccattaag gacagtgtga tggtccttag
901 cgcaacccat cgctacaaga agaagtatgt tactactctg ctatacaagc ccatttgaag
961 ggatcccttc ttgcctctaa ggattcagga gaagcatctc ccttgcattt ctggactgaa
1021 ccagtcttac ctgagactgg aaggctgatt tgctttgagg ctgatatgtg tgtttcagag
1081 cctctgagta ggatgctctg cttttgcatt tgattgcaga tgagagcttt atgagttcac
1141 ggaatttatt ttaagaaaaa aaaatataca tatgagaaga aggtagatgg aagcctccta
1201 gccccagcta gaagtattgt ttctgcctgt gggttttcac caagacctgt ttgggggcgc
1261 tgcaggaata actatatagg aagatttttc ctaaaatgaa agaacagcaa actcttagga
1321 tccttgttgg gtggagattc tatcactgct accttggctc tccaaggaat gggcttgtgc
1381 tagaccgctg ccctacttaa cagctgcctc attgcaaggg cagtttttct tgcatgggtt
1441 ctctatattc ccagagtatg tggcacaatc tgtgttgttt atatgatacc agatgcccca
1501 caagaaccct tattcctctc atttcacatt cttcctttaa tagcctcctt cagatcccat
1561 acctgacccc tctctaacac aaaacttatt gggtaagtga ctttgaaaag ttttgtggca
1621 cctgacccac cccagacact agggctatca gaaggtctcc tttttagccc agcacaggcc
1681 caggccactt tgtcgtgttt gttttaactt ctaaagaaaa tatgtttcag cattataaga
1741 aaggcagaat gcagaacacc tacatttttg ttttagtttg gtgccaaggc tcaggctgta
1801 ttggcaaatt cccgaaagtt ttcccacttt gcctggccct gcttctgtct tttctttctc
1861 agtaaacagt tctgaaggca ggagtggaac ccgggagtat tttcatgtct ttcatccttg
1921 aaagattttt atgtgcctgc attttttttt aattaaaaaa tgccttttca ttggtcttaa
1981 gagaccgcat tggagaattt caggcttttg ataaatgctt cttcaaagag attttcttct
2041 ctagtctagc cttccacatt cttagattaa tatggccaac cctgtacaca tcactacact
2101 aaacactgct ctagataaac tgctcaagtt catttaactc atttgatgca cctaaagggg
2161 ttcctcattt taaagatttg ttagaccaag aagcaagaga gtattcctag tattcccaac
2221 catgaaaagt atcattcttt gcaccaaatg ttaacaaaat cattttgttc tcctgcctct
2281 tctttttaaa ggtgtttgat gattaagtgg ggtcactgaa ttccatttgt ggactgaaaa
2341 gtattcaatc cacttttggg gttcagagat aaaacatttt ttcccaagta gctggggctc
2401 ttccattttg cagataagtc aaataatcaa cactaaagga ggctaaactg ttgatgaatg
2461 agagactccc tgactgctca gatgacccta gccacactga aagggcacct acaggtcagt
2521 ttagctacct cctgtctttc ccatgcaaag ctgataacac agttgtcttt ggacttgtag
2581 acctcttgga ttccaggtgt gatggagtaa agtgtgggat tgttgttttg ctgggatgca
2641 aataactaaa tgctttggtg gttaattgct aagagtaaat actactttag ccatccaagc
2701 caccttctgc agcaaaaggc ttttgtggag aaccttttat gttcccaacc actttttgaa
2761 tggtgtgcca tttaaaaatc caggccagat cctattataa ccaactctca ggatttacag
2821 ccttcagttg tactagaatt ttgtttttat ccaatactca ttaaataagt gggccactta
2881 ggaagattca aaatcttggt tattacatga agtttgttat atttcttgtc aacagtattg
2941 aaatgtaata tgtatgtgtt catgtatgaa aatttttact ccacacaggt gtttcagtag
3001 agtggggcag gaaaagagat ctcttcgatt tctttcaggc ctgaggcttt tgtgaaatgc
3061 gtcagccccc tgtgacagta ggttttgatg ctagtgatct tcagatcttt ctctctggaa
3121 atgtgcagag agtgtcagtt tcccaagttc tgaggtaact ctcagcccag atgtgaaatg
3181 ggagcctacc agctggtata gaagggaatg ggtaggaggc actgggtgct gactcattca
3241 gcactgtccc ttttctatac tgctgataca tcccatggtt ctgagaagcc ttatctcagt
3301 ctatttggaa gagagggagg aagagaagga agtaacccaa agtactactc atttatcctt
3361 gtatattgat tagttaaagg gataattaat ttaatgctga ggagagtttg acagattttg
3421 aaaatgagta aaggcaaaaa aaattttttt agcctttatt ttgcctttgg gaattttaca
3481 gagtcaaagt aggcagaata agaaaatagt tcttcaggag ggccgacctt taaagaactt
3541 caacatagtt tcggaattgt ggggaagaga agagtgactg agctgagaag taataataga
3601 ataaagggtt gagtaactta gaactgaaaa tgatctcttt taaaaagaaa ttaaatcaga
3661 caccacatgg tggtgtcctt ggatctcact gtgcagaatt agcagtgtat aaccatcttc
3721 tcttttcatc ttgttccaat tctctcctct ttcctttcca ttctgcttta agctcacgtg
3781 tcaggcagac tttaccagag tgtcagacat tacctaaaac acatacgtta gccatgctgc
3841 tggtatggag aaattccaca ccatgattat tagcctcctt taagctgaat gggatttaac
3901 cattctaggc aacacccctg aagggcatac ctaacctcaa tagtgttggc ttttaaaacg
3961 tatgtttgta tggtagagaa actttgtaaa agaagaatcc aagagaagtt tgtgaggatc
4021 ctacaaaccc aggcccactc actttgctct aattctttct agtatcttgt agatctaatg
4081 ggtctgggat aaaaactttg aaaagtgtca atattccatg tatgctgctg aaatgaagtt
4141 aagtttggaa agaagtgata cctctagact gggtttatat taatctggga tataaatgaa
4201 gaagacatac taatagaact ccttgctttt aattggggaa atagggcttt aataattttg
4261 acctcaacta aaaatgatat gcaatagtct ctgtgtgtgt ttgaaataca ttgtgttctc
4321 agagatttct acattctcac gttctagtga tttggggcat gggcttaata gcagatgtac
4381 agtgtattcc tgcattattg tgattcccct taaagcccag ttcttgctgt cttctaccag
4441 gggctgctga ctccagttac ccatggaatg caggacctgg gaggggtagc cattagggtc
4501 tttcaaaact ctttggatct aagcatttgt ctctccttaa gtgccaatca caattggata
4561 tggaaggact gtgatttctg caatgaaccc aaacttttag agtaaaaagc caaatttaaa
4621 ttataagaaa gaagggaaaa aagagaaaaa ctcaagtcta ttacttgtag agtccaattc
4681 ttagcaatgg aatccctcta ggattctagt ttgggctttg tctggatttg cttttctcag
4741 ttgtgctttg aagtgaataa gctttgttac aaattaattt tttattagtt ccaatattag
4801 ttggagttaa cttgaattga ttgtatgtag cacagcactt ttgcagtaag attggtgtga
4861 aatactaaac actatggatt ttgtaggtgt caggttaaat ggtcaaggga tacctacatt
4921 aagtcatata ttaggtattg atgatcttac ttcttttctg ttcccctgta caaaacactt
4981 acctaaccca gcttgtggtt ttaggacagc caaagctcac tgttgttggt tagtcctaat
5041 cactacacgg gtctcataaa tgagacttgt ttgaattttg gtacattgga gcatgttggt
5101 tggtattaca cggcagcatt tcgaatgagt gcagctctgt gtctgtcaga aaggagagat
5161 aagactactt tgaaggggat taaatatgtg agtcctcttt ttaatggtgc tttttgtaac
5221 ctttaatgct gaggtacaga gctgcttttc aatatttcat aaaggagtgg cagacaagag
5281 tggattttaa agctgttctt caaacgtaat ttgtcactgg actctgacac acctggaaat
5341 tatatgatat gatacataca gaaatgttgt gggttttttc cataaaactt taataaaagt
5401 attacacagc aaaaaaaaaa aaaaaaaaaa
//