LOCUS BC053602 2065 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 15 open reading frame 38, mRNA (cDNA clone
MGC:61550 IMAGE:5770387), complete cds.
ACCESSION BC053602
VERSION BC053602.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32699049.
FEATURES Location/Qualifiers
source 1..2065
/db_xref="H-InvDB:HIT000053936"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61550 IMAGE:5770387"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2065
/gene="C15orf38"
/gene_synonym="MGC61550"
/db_xref="GeneID:348110"
/db_xref="HGNC:HGNC:28782"
CDS 93..773
/gene="C15orf38"
/gene_synonym="MGC61550"
/codon_start=1
/product="chromosome 15 open reading frame 38"
/protein_id="AAH53602.1"
/db_xref="GeneID:348110"
/db_xref="HGNC:HGNC:28782"
/translation="MSRIYHDGALRNKAVQSVRLPGAWDPAAHQGGNGVLLEGELIDV
SRHSILDTHGRKERYYVLYIRPSHIHRRKFDAKGNEIEPNFSATRKVNTGFLMSSYKV
EAKGDTDRLTPEALKGLVNKPELLALTESLTPDHTVAFWMPESEMEVMELELGAGVRL
KTRGDGPFLDSLAKLEAGTVTKCNFTGDGKTGASWTDNIMAQKCSKGAAAEIREQGDG
AEDEEWDD"
BASE COUNT 518 a 537 c 557 g 453 t
ORIGIN
1 cgcgggtccc cgcgcgtcct gcagcacttc ccgcgccgcg cccccagccc agtgcgccgg
61 ctctgtgccg gggtgcccgg gcggtcggga gaatgagccg catctaccac gacggcgcgc
121 tccggaacaa ggcggtgcag agcgtccggc tgccaggggc ctgggacccc gccgcccacc
181 aggggggaaa tggtgtcctg ctggagggag aactgatcga tgtatctcgg cacagcatct
241 tggacactca tggcaggaag gagcgctact acgtgctgta tatccggccc agtcacatcc
301 atcgccgtaa attcgacgcc aagggaaatg aaatcgagcc caacttcagc gccaccagga
361 aggtgaacac gggcttcctc atgtcgtcct acaaggtgga agccaagggg gacactgaca
421 ggctcacgcc cgaggcgctg aaggggctgg tcaacaagcc agagctgctc gcgctgacag
481 agagcctcac ccccgaccac acagtggcgt tctggatgcc cgagtcagag atggaggtga
541 tggaactcga gctgggggcc ggggtacggc tgaagactcg gggcgatggt cccttcctgg
601 attcattggc caaacttgag gctggaacag tgaccaagtg taatttcact ggtgatggaa
661 agacaggggc atcctggaca gacaacatca tggcccaaaa gtgttcgaag ggggctgcag
721 cggagatccg agagcagggg gatggggcag aggacgagga gtgggatgac tgagggacgt
781 ggctgcctct gggggcacca gcaccttctg tagcattgtg gaacatttct tccatgaact
841 tctactctgg agctggagag aacagtctgc caagtcttac ctggttcttc cccatagcca
901 ccttggaata ctctttgaac aagctctgct aaaaccaaac ccatgaccac tgtgttggtg
961 gtggggcctc atgctgtggc tcagggaggg cccctccctg catgtgagtc tagccttcct
1021 agacattaca tgatgaccct ttaaaaaaaa attagagatg gaggtctcac tgtgttgccc
1081 aggctgatct cgaactcctg gactcaagcg atccacccac ctccacctcc caaggtgttg
1141 ggattacagg cgtgagccac cgcacccagc ctcatgttga ccctggccct ggatagcagc
1201 tttgtttgta gaggcaggtg gtgggagaga ccctaggaca gcctgagagt aactggacct
1261 ggtattggtg cggagtgggg aatatccctt gtctaaatgc agagcagctg agagaagtta
1321 gcggggctct tcctccgttc tcattgtttc ctgctttcct tccccaccca ccccttcctc
1381 agcactctgt gttgtagcct gtactatcct gcttcaagcc tccgtgtccc ttgtaccttc
1441 cccctacctt gagttgccag ttctttactc cctcaaatgt tcccatgcca cctctggggt
1501 ttctgttatc tgacatccct ggctgctttc ctggtagatg ccattcccag agaggccaac
1561 agcgttccca ggcgtggctg gctggtccgc atctctcaga ctcactctgc caggctacag
1621 ttttgagaat accttttttg ttgttgtttt gtacctggag aactttttat gaatgagtaa
1681 atcttcagaa aggaattcct ccacccttac tgggttattg tcaggtgtaa acggcctttc
1741 agctgagcaa tgttcctatg agaaggaagc catttctctt ggctcatgaa cactgccttt
1801 tgggtagtat acccacaccc agatctgtga agagacctgg aattgaagtc tccatgtcgt
1861 caggacttgg tggcatgtgg atcttgcttg acttgggaaa agagagggtg gtggtgaact
1921 aataattatg gagtccccct aatgtgtcga acacaatgct agatgattaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaa
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