LOCUS BC053553 2620 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens neuroepithelial cell transforming 1, mRNA (cDNA clone
MGC:61640 IMAGE:6137683), complete cds.
ACCESSION BC053553
VERSION BC053553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: k Column: 5.
FEATURES Location/Qualifiers
source 1..2620
/db_xref="H-InvDB:HIT000053913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61640 IMAGE:6137683"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2620
/gene="NET1"
/gene_synonym="ARHGEF8"
/gene_synonym="NET1A"
/db_xref="GeneID:10276"
/db_xref="HGNC:HGNC:14592"
/db_xref="MIM:606450"
CDS 95..1885
/gene="NET1"
/gene_synonym="ARHGEF8"
/gene_synonym="NET1A"
/codon_start=1
/product="neuroepithelial cell transforming 1"
/protein_id="AAH53553.1"
/db_xref="GeneID:10276"
/db_xref="HGNC:HGNC:14592"
/db_xref="MIM:606450"
/translation="MEPELAAQKQPRPRRRSRRASGLSTEGATGPSADTSGSELDGRC
SLRRGSSFTFLTPGPNWDFTLKRKRREKDDDVVSLSSLDLKEPSNKRVRPLARVTSLA
NLISPVRNGAVRRFGQTIQSFTLRGDHRSPASAQKFSSRSTVPTPAKRRSSALWSEML
DITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHI
FGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAKAL
LDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHP
DVQLLEDAILIIQGVLSDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGE
LRSKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGG
SFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQQWFNCIRAAIAPFQSAGS
PPELQGLPELHEECEGNHPSARKLTAQRRASTVSSVTQVEVDENAYRCGSGMQMAEDS
KSLKTHQTQPGIRRARDKALSGGKRKETLV"
BASE COUNT 720 a 596 c 603 g 701 t
ORIGIN
1 ggcgctttct gcctggcaga ggctggcggg catcgtgccc gtccctgccg gtctcccggg
61 cacccggcca ccgccccacc ccctcctccg tgccatggag cccgagctgg cggctcagaa
121 gcagcctcga ccgcggaggc gaagccgccg ggcctctggg ctcagcacgg agggagcgac
181 ggggccttcg gccgacacct ccgggtcgga gctggacggg agatgttccc ttcggagagg
241 cagctccttc acattcttaa cacctggccc caactgggac ttcactttga aaagaaaacg
301 cagagagaaa gatgatgatg ttgtaagcct tagcagcctt gatctgaagg agccaagcaa
361 taaaagagtt cgacctctgg ctcgtgtcac gtccttggca aatttaatct ctcctgtaag
421 aaatggagct gtcagacgtt ttggtcaaac aatacagtca tttacccttc gtggtgacca
481 cagatcccca gcctctgccc agaagttttc tagcaggtca acagtcccaa cacccgccaa
541 gagaaggagc agtgcactgt ggtcagagat gctggacatc accatgaagg agtctctcac
601 caccagggag atcagacggc aggaggcaat atatgaaatg tcccgaggtg aacaggattt
661 aattgaggat ctcaaacttg caagaaaggc ctaccatgac cccatgttaa agttgtccat
721 catgtcagaa gaggaactca cacatatatt tggtgatctg gactcttaca tacctctgca
781 tgaagatttg ttgacaagaa taggagaagc aaccaagcct gatggaacag tggagcagat
841 tggtcacatt ctcgtgagct ggttaccgcg cttgaatgcc tacagaggtt actgtagtaa
901 ccagctggca gccaaagctc ttcttgatca aaagaaacag gatccaagag tccaagactt
961 cctccagcga tgtctcgagt ctcccttcag tcgaaaacta gatctttgga gtttcctaga
1021 tatccctcga agtcgcctag tcaaataccc tttactgtta aaagaaattc ttaaacacac
1081 tccaaaagag caccctgatg ttcagcttct ggaggatgct atattgataa tacagggagt
1141 cctctctgat atcaacttga agaaaggtga atccgagtgc cagtattaca tcgacaagct
1201 ggagtacctg gatgaaaagc agagggaccc cagaatcgaa gcgagcaaag tgctgctgtg
1261 ccatggggag ctgcggagca agagtggaca taaactttac attttcctgt ttcaagacat
1321 cttggttctg actcggcccg tcacacggaa cgaacggcac tcttaccagg tttaccggca
1381 gccaatccca gtccaagagc tagtcctaga agacctgcag gatggagatg tgagaatggg
1441 aggctccttt cgaggagctt tcagtaactc agagaaagct aaaaatatct ttagaattcg
1501 cttccatgac ccctctccag cccagtctca cactctgcaa gccaatgacg tgttccacaa
1561 gcagcagtgg ttcaactgta ttcgagcggc cattgccccc ttccagtcgg caggcagtcc
1621 acctgagctg cagggcctgc cggagctgca cgaagagtgt gaggggaacc acccctctgc
1681 gaggaaactc acagcccaga ggagggcatc cacagtttcc agtgttactc aggtagaagt
1741 tgatgaaaac gcttacagat gtggctctgg catgcagatg gcagaggaca gcaagagctt
1801 aaagacacac cagacacagc ccggcatccg aagagcgagg gacaaagccc tttctggtgg
1861 caaacggaaa gagactttgg tgtagagaag gctctgtgtg ttaactgatg ggagagactg
1921 tttgtttata aatgtgtaca gttttgtttt ctcgtaaggg gagcatcata gggttacttt
1981 ataccagttg taacattttc attgtttttg gttgttcttt tttctttttt taatggcagc
2041 taaagatata cagattactg ttaaattgca gtcctttttt ttttaaagat attttcttga
2101 gttatttaga acatggtaag cctggtattt tttaatcaaa caaaatattt atgaaatggg
2161 ttttctctta attctggatt catcatggct ttctaatacc aattgtaata tttacaatat
2221 tcaccaaaac ttagaatttt gcaaatgctg gaattctgcc agtgtttctt tgctaagcct
2281 tgcatgcaaa atttgaaatt ttaacattgg cacccaaaac ctacatggaa tgtatgtctg
2341 gagtatttca aactttacat tgaaacataa tttccttgga aaacaaacca taagcctgag
2401 gaggttttta tcaactggaa tgctttatat tagtttgttt ttcactgtac attcctcatt
2461 ttacattcat ttaacctgcc gattatttaa tttttttatt gtaaagtagt ttttagcatt
2521 tgcttttatt tttttacttt gatgcctttt caaattggca tgtctttaaa gtatttttct
2581 tcctgattaa aaatgtgtgt gtaaaaaaaa aaaaaaaaaa
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