LOCUS BC053530 3769 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens retinitis pigmentosa 2 (X-linked recessive), mRNA
(cDNA clone MGC:61616 IMAGE:3871941), complete cds.
ACCESSION BC053530
VERSION BC053530.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: a Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5902059.
FEATURES Location/Qualifiers
source 1..3769
/db_xref="H-InvDB:HIT000053900"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61616 IMAGE:3871941"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3769
/gene="RP2"
/gene_synonym="TBCCD2"
/db_xref="GeneID:6102"
/db_xref="HGNC:HGNC:10274"
/db_xref="MIM:312600"
CDS 110..1162
/gene="RP2"
/gene_synonym="TBCCD2"
/codon_start=1
/product="retinitis pigmentosa 2 (X-linked recessive)"
/protein_id="AAH53530.1"
/db_xref="GeneID:6102"
/db_xref="HGNC:HGNC:10274"
/db_xref="MIM:312600"
/translation="MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSG
LKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFF
RNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFK
DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANR
SIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAED
AQRVFREKAPDFLPLLNKGPVIALEFNGDGAVEVCQLIVNEIFNGTKMFVSESKETAS
GDVDSFYNFADIQMGI"
BASE COUNT 1161 a 626 c 712 g 1270 t
ORIGIN
1 gcggggcgtt gtccggagag ctgcgaggcc ggggttccca gggttcacgc cacactctag
61 gaagtgcctg agctagtgag ctggccaacg agctccgcgg gctgggacca tgggctgctt
121 cttctccaag agacggaagg ctgacaagga gtcgcggccc gagaacgagg aggagcggcc
181 aaagcagtac agctgggatc agcgcgagaa ggttgatcca aaagactaca tgttcagtgg
241 actgaaggat gaaacagtag gtcgcttacc tgggacggta gcaggacaac agtttctcat
301 tcaagactgt gagaactgta acatctatat ttttgatcac tctgctacag ttaccattga
361 tgactgtact aactgcataa tttttctggg acccgtgaaa ggcagcgtgt ttttccggaa
421 ttgcagagat tgcaagtgca cattagcctg ccaacaattt cgtgtgcgag attgtagaaa
481 gctggaagtc tttttgtgtt gtgccactca acccatcatt gagtcttcct caaatatcaa
541 atttggatgt tttcaatggt actatcctga attagctttc cagttcaaag atgcagggct
601 aagtatcttc aacaatacat ggagtaacat tcatgacttt acacctgtgt caggagaact
661 caactggagc cttcttccag aagatgctgt ggttcaggac tatgttccta tacctactac
721 cgaagagctc aaagctgttc gtgtttccac agaagccaat agaagcattg ttccaatatc
781 ccggggtcag agacagaaga gcagcgatga atcatgctta gtggtattat ttgctggtga
841 ttacactatt gcaaatgcca gaaaactaat tgatgagatg gttggtaaag gctttttcct
901 agttcagaca aaggaagtgt ccatgaaagc tgaggatgct caaagggttt ttcgggaaaa
961 agcacctgac ttccttcctc ttctgaacaa aggtcctgtt attgccttgg agtttaatgg
1021 ggatggtgct gtagaagtat gtcaacttat tgtaaacgag atattcaatg ggaccaagat
1081 gtttgtatct gaaagcaagg agacggcatc tggagatgta gacagcttct acaactttgc
1141 tgatatacag atgggaatat gaagtgcaat gtggaaccag gacttggtat taagcctttc
1201 ccaacttgtg aatatagaat ttgataatac acttttgtgt attagcaatg gtttttacta
1261 atgctaaaac ttttaaagtt tattttttaa taaattgttg agtattacat catttacttg
1321 aggttcaaaa ataattcatt ttaaattaag tagttttaat cagcttaaaa gctatttaac
1381 ccattttaat aagcttgcag ttttgtttct ctgcatatga tattcttatt agaaaacaga
1441 agtagctaaa agtttattat tttaatccta tttaaatgtt ctttcaaatc tctaataatt
1501 taaactttcc tcagtgctcc atgatacttt ttttgagact ccatatcatt gcttatttta
1561 cctttttcaa tttagaggga tttgttacta gtcgatcaat tagaatgaac ctatgcacat
1621 ttttatgtac acatatccag ttatataatt gcttcctagt tgcattatat ggcaaatgag
1681 attttgtaca tggagttgac ataatacttt gtaaattgaa ttttttaaag aaataggcat
1741 ttgataacca gcttggcaag taactctact aacagatgtt ggtatagcta tttaaagact
1801 acttcgtaag tagtatgatt atttgaataa attacacatt gtttagtttt ttaatacaac
1861 tgctatatga ctcttctgct tcctgataag aaaaggtata tgcaatgcta aaactgtaga
1921 agcccaatca ccagcagttt ttaaaaaggt gataactttt attagctctt gtgggctatc
1981 aagagaatta gaacaaaacc ttgtgacttt taggtaagaa ataggcatga tgataagcta
2041 tgcagattat taaaaagctt gatacatttg atttttcatt agatatgcca ttcatatcaa
2101 gtaatgttca agtatgataa aattattttg gttgctttaa agcactgttt cccaaatcta
2161 cctgatcata ataatttacc aggaagcaga ggagagctac ttgtttaaaa atccacattc
2221 ttggacccaa tcctcagatg cacggattca gtcttcaggg gaaactctgt tttaaggggt
2281 atgttgtaat ctaaagtaat tggttcagga ggtgtcaata ggttgaactt gtgagaaggc
2341 actgaatctg ccatccacat cacatatagc agctattatg aaatcagctt tcataggcct
2401 atttttaaaa ggaatctgaa atttaattct attttgataa aactaagact gaaaataacc
2461 acttgtaaac attcctatga ttgttactaa aatgtatttt catgtttaaa atgtttttgg
2521 atatttttgg gttaataact actacattga attgcatgtt aaggtgcaga aataatacat
2581 taaaagattt tcactttaaa ttaattagta atattgagcg ctcaccctgt gcgtggcctt
2641 gtgctaacca ttagcactgc atcatttcaa ttcttttata agggcattca atactacaaa
2701 atcaacatga tttcataagg tgcaaataaa agttggtgac agatttaata taattttgat
2761 cacaatttac aaatgatctt tgcaaatagt ggtcagacgg cattagtttt tcccttagtt
2821 aagctaaatt aaagggactc catcctgtta tgattatatt attattatta ttattattat
2881 ttttgaggtg gagtttcact cttgttgccc aagctggagt gcaatggcgc gatctcggct
2941 caccacaaca tccgcctcct gggttcaagc gattctcctg cctcagcctc ctgagtagct
3001 gggaatacag gcatgcgcca ctacacctgg ctaatttttg tatttttagt tgagatgggg
3061 tttttccacg ttggtcaggc tggtctcgaa ctcctgacct caggtgatcc gtccacctca
3121 gcctcccaaa gagctgggat tacaggtgtg agctaccgcg cctggccatg atgatattat
3181 taaacaccat tattcacatt tcaaataata acaatacttt ttgtttttca aaaataaaat
3241 gcaatgttat ataaagctat aaactaagtt ctttatgata tttgagcaac aactcaggaa
3301 tataacatat aagggagatg ttaatttaaa aatttccact acacttatta tctattaacc
3361 aaagcttaaa attttgtatt cttctgttag ataagacctt ttacccattt aatttgtctt
3421 taaggacagt catttggctt ctgaatgttt gaaacgattt taaaaaataa gtagtgctat
3481 ggttgtttct ataattctaa cctttgatag taatcagaat gtattacatt tcatttctga
3541 atagcttttg aatttatgaa aaattattaa caatgaaaaa ttggtaattt tattaagtta
3601 tatgtgttta aatattatat tagcttattt ctcttgcatt aatagtactg ctgtttttgt
3661 tttgcttctt tatatttatg tctagctttt atatgtaatt tatctagtgt ttataaaatg
3721 tgatttgtaa taaatgttgt taaaatgaaa aaaaaaaaaa aaaaaaaaa
//