LOCUS BC053359 2213 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens ligand dependent nuclear receptor corepressor, mRNA
(cDNA clone MGC:61698 IMAGE:6009825), complete cds.
ACCESSION BC053359
VERSION BC053359.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2213)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2213)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: i Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930472.
FEATURES Location/Qualifiers
source 1..2213
/db_xref="H-InvDB:HIT000053884"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61698 IMAGE:6009825"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2213
/gene="LCOR"
/gene_synonym="FLJ38026"
/gene_synonym="KIAA1795"
/gene_synonym="MLR2"
/gene_synonym="RP11-175O19.1"
/db_xref="GeneID:84458"
/db_xref="HGNC:HGNC:29503"
/db_xref="MIM:607698"
CDS 485..1705
/gene="LCOR"
/gene_synonym="FLJ38026"
/gene_synonym="KIAA1795"
/gene_synonym="MLR2"
/gene_synonym="RP11-175O19.1"
/codon_start=1
/product="LCOR protein"
/protein_id="AAH53359.1"
/db_xref="GeneID:84458"
/db_xref="HGNC:HGNC:29503"
/db_xref="MIM:607698"
/translation="MQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPT
AATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSLSHSP
GCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQIS
EELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFRGNGALSNI
SDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTGDQYSYS
SLVMGSQTESALSKKLRAILPKQSRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDP
GSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGT
LKNPPKKKMKLMSG"
BASE COUNT 685 a 484 c 484 g 560 t
ORIGIN
1 ggcggcagca atgctccgtt gagagacgcg gctttcggca agaactggat tcgtggcgcc
61 acaagctcat tcactgtgta ggtcccgttt ccctctgtgc ggcggccggc gggaccataa
121 gggcttaact catatattta acccccctcc aaaaaggttt gaaagtattc ttgaagggct
181 gtttggacct gcattattaa aagatctcag tttatttaaa gactgtgaac ctgaaagcat
241 ttctgattgg acttttgatg aaaactgttt attctgttgc ttgagaagag ataaagtaaa
301 gggacactta gtcggtctgg atgaaccagc ttcgggagct gggcaagaag ctctgcttaa
361 acaagagcaa gcaaaaatca ttcgattcga gagacaagca gaagaattcc tcaatgcagt
421 cttttataga aaagacagtc cctgggtctc cgaccccaat attcccctag tggcccgtga
481 gatcatgcag cgaatgatcc aacaatttgc tgctgaatat acctcaaaaa atagctctac
541 tcaggacccc agccagccca atagcacaaa gaaccaaagc ctgccgaaag catctccagt
601 caccacctct cccacggctg caactactca gaaccctgtg ctcagcaaac ttctcatggc
661 tgaccaagac tcacctctgg accttactgt cagaaagtct cagtcagaac ctagcgaaca
721 agacggtgta cttgatctgt ccactaagaa aagtccatgt gctggcagca cttccctgag
781 ccactctcca ggctgctcca gtactcaagg gaacgggcga cctgggagac ccagccagta
841 ccgcccagac ggacttcgga gtggtgatgg ggtacctcca agaagcttac aggatggaac
901 cagggaaggt tttggacact ccacatcact caaagttcca ctggctcgat ccctgcagat
961 tagtgaagaa ctactgagca gaaaccaatt gtccacagct gccagccttg ggccatctgg
1021 attacagaat catggacaac acttaatatt atccagggaa gcctcttggg caaaaccaca
1081 ttacgagttc aacctcagcc gtatgaagtt caggggaaat ggtgcactca gcaacatcag
1141 tgaccttcct tttcttgcag aaaactctgc ctttccaaaa atggcacttc aagcaaaaca
1201 agatggaaaa aaggatgtga gccattcatc tcctgtagat ttaaagatac cacaagttcg
1261 aggaatggat ctttcttggg agtctcgcac tggtgatcag tacagctata gctctttggt
1321 aatgggttca caaacggaga gcgcgcttag taaaaaatta agggctattc ttccaaaaca
1381 aagtagaaaa agcatgttag atgctggacc cgattcttgg ggctcagatg ctgagcagtc
1441 tacctctgga cagccatatc ccacatcgga tcaagaagga gaccctggct ccaagcagcc
1501 tcggaagaaa agagggcgtt acagacagta caacagtgag atactggagg aagcaatctc
1561 agtggttatg agtggaaaaa tgagtgtttc caaagctcag agtatttatg ggattcccca
1621 cagtacactg gagtacaaag taaaggagag gctgggcact ttgaaaaacc ctccaaagaa
1681 aaagatgaaa ttaatgagtg gatgacaatc gagcagcaga agaatggtgt gcctaccctt
1741 taatgctgca gtttaagaga acttgtattg tgtcatttca gattgtaggc tgagagttgt
1801 aaatagtgaa aatttgagta cttctattat ttgttttggt tagaaagtga atttaaaaaa
1861 caaaccaaac tctaaacttt ctcagattaa aagtcctgag acctgaagat tgtaatattc
1921 atgtctgtga agcttttaaa cattacactt gagatcagtc atgacttgat attcaggtaa
1981 attttctttt ccaagaagct tttgaataag catatttcct ccaaaggtct ctctctttct
2041 ctctcttttt ttgagtgtag attattttaa agcactaatt gcattacatt ggtaactgca
2101 atataaaata gccattattg ttttgtgaag catggttgaa attagctagt ggtccctttt
2161 gaatttcatg agcctctcaa aaaagaaaaa cttaaaaaaa aaaaaaaaaa aaa
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