LOCUS BC052996 3853 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens catenin (cadherin-associated protein), alpha 2, mRNA
(cDNA clone MGC:60356 IMAGE:6187158), complete cds.
ACCESSION BC052996
VERSION BC052996.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3853)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3853)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55770845.
FEATURES Location/Qualifiers
source 1..3853
/db_xref="H-InvDB:HIT000053866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60356 IMAGE:6187158"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3853
/gene="CTNNA2"
/gene_synonym="CAP-R"
/gene_synonym="CAPR"
/gene_synonym="CTNR"
/db_xref="GeneID:1496"
/db_xref="HGNC:HGNC:2510"
/db_xref="MIM:114025"
CDS 214..2931
/gene="CTNNA2"
/gene_synonym="CAP-R"
/gene_synonym="CAPR"
/gene_synonym="CTNR"
/codon_start=1
/product="catenin (cadherin-associated protein), alpha 2"
/protein_id="AAH52996.1"
/db_xref="GeneID:1496"
/db_xref="HGNC:HGNC:2510"
/db_xref="MIM:114025"
/translation="MTSATSPIILKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNK
GPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAKESQDLKEELVAAVEDVRKQGET
MRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLLILADMADVMRLLSHLKIVEEAL
EAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKKNAT
MLYTASQAFLRHPDVAATRANRDYVFKQVQEAIAGISNAAQATSPTDEAKGHTGIGEL
AAALNEFDNKIILDPMTFSEARFRPSLEERLESIISGAALMADSSCTRDDRRERIVAE
CNAVRQALQDLLSEYMNNTGRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSF
LETNVPLLVLIEAAKSGNEKEVKEYAQVFREHANKLVEVANLACSISNNEEGVKLVRM
AATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDD
FLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVY
TEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIR
KAVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAK
IAEQVEIFHQEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSD
VINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAE
VQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVV
SWKMKAPEKKPLVKREKPEEFQTRVRRGSQKKHISPVQALSEFKAMDSF"
BASE COUNT 1106 a 849 c 1006 g 892 t
ORIGIN
1 gagcggcttc gcttccagcc ccgagtgagg cggagaccca ggcgggcggg cagagcaggc
61 ggcaccgcac ctcgtccaga ggcggctgca gcagctgctg cccttgtccc tgccgccgcc
121 tctccagtcc cttctgtgat taccactcca gctgctggga acgggcgaga aagaggagga
181 ggcgagaaac tcccaccgac ccacagaggg agcatgactt cggcaacttc acctatcatt
241 ctgaaatggg accccaaaag tttggaaatc cggacgctaa cagtggaaag gctgttggag
301 ccacttgtta cacaggtgac tacacttgtc aacacaagca acaaaggccc atctggtaaa
361 aagaaaggga ggtcaaagaa agcccatgta ctagctgcct ctgtagagca agccactcag
421 aatttcctgg aaaagggtga acagatcgct aaggagagtc aagatctcaa agaagagttg
481 gtggctgctg tagaggatgt gcgcaaacaa ggtgagacga tgcggatcgc ctcctccgag
541 tttgcagatg acccttgctc gtcggtaaag cgcggcacca tggtacgggc ggcaagggct
601 ttgctctccg cggtgacacg cttactcatc ctggcggaca tggcagatgt catgagactt
661 ttatcccatc tgaaaattgt ggaagaggcc ctggaagctg tcaaaaatgc tacaaatgag
721 caagaccttg caaaccgttt taaagagttt gggaaagaga tggtgaaact taactatgta
781 gcagcaagaa gacaacagga gctgaaggat cctcactgtc gggatgagat ggcagccgcc
841 cgaggggctc tgaagaagaa tgccacaatg ctgtacacgg cctctcaagc atttctccgc
901 cacccagatg tcgccgctac gagagccaac cgagattatg tgttcaaaca agtccaggag
961 gccatcgccg gcatctccaa tgctgctcaa gctacctcgc ccactgacga agccaagggc
1021 cacacgggca tcggcgagct ggctgcggct cttaatgagt ttgacaataa gattatcctg
1081 gaccccatga cgttcagcga ggccaggttc cggccgtccc tggaggagag gctggagagc
1141 atcatcagcg gcgcagcgct gatggccgac tcctcctgca cgcgagacga ccggcgcgag
1201 aggatcgtgg cggagtgcaa cgccgtgcgg caggcgctcc aggacctgct cagcgagtac
1261 atgaataata ctggaaggaa agaaaaagga gatcctctca acattgcgat tgataagatg
1321 actaagaaaa caagagatct aaggagacag cttcggaaag cagtgatgga tcacatatct
1381 gactctttcc tggaaaccaa tgttcctttg ctagttctca ttgaggctgc aaagagcgga
1441 aatgaaaagg aagtgaaaga atatgcccaa gttttccgtg agcatgccaa caaactggta
1501 gaggttgcca atttggcctg ttccatctcc aacaatgaag aaggggtgaa attagttcgg
1561 atggcagcca cccagattga cagcctgtgt ccccaggtca tcaatgccgc tctgacactg
1621 gctgcccggc cacagagcaa agttgctcag gataacatgg acgtcttcaa agaccagtgg
1681 gagaagcagg tccgagtgtt gacagaggcc gtggatgaca tcacctcagt ggatgacttc
1741 ctctctgtct cagaaaatca catcttggag gatgtgaaca agtgtgtgat agccctccaa
1801 gagggcgatg tggacactct ggaccggact gcaggggcca tcaggggccg ggcagctcga
1861 gtcatacaca tcatcaatgc tgagatggag aactatgaag ctggggttta tactgagaag
1921 gtgttggaag ctacaaaatt gctttctgaa acagtgatgc cacgcttcgc tgaacaagta
1981 gaggttgcca ttgaagccct gagtgccaac gttcctcaac cgtttgagga gaatgagttc
2041 atcgatgcct ctcgcctggt gtatgatggc gttcgggaca tcagaaaggc tgtgctgatg
2101 atcaggaccc cagaagaact agaggatgat tctgactttg agcaagaaga ttatgatgtg
2161 cgtagcagga caagtgttca gactgaggat gaccagctca ttgcagggca gagcgcacgg
2221 gccatcatgg cgcaactacc gcaggaggag aaggcaaaaa tagctgagca ggtggagata
2281 ttccatcaag agaaaagcaa gctggatgca gaagtggcca aatgggacga cagcggcaat
2341 gatatcattg tactggccaa gcagatgtgt atgatcatga tggaaatgac agacttcaca
2401 agaggcaaag gcccattgaa aaatacatct gatgtcatta atgctgccaa gaaaattgcc
2461 gaagcaggtt ctcgaatgga caaattagct cgtgctgtgg ctgatcagtg tcctgattca
2521 gcatgtaagc aggatttatt agcctacctt caacgaattg ccttgtattg ccatcagctt
2581 aatatctgca gcaaggtgaa ggcagaagtg cagaatctgg gaggagagct cattgtgtca
2641 gggctggaca gtgccacatc gcttatccag gcagctaaaa acctgatgaa tgctgttgtc
2701 ctcacggtga aagcatccta tgtggcctca accaaatacc agaaggtcta tgggacagca
2761 gctgtcaact cacctgttgt gtcttggaag atgaaggctc cagagaagaa gccccttgtg
2821 aagagagaaa agcctgaaga attccagaca cgagttcgac gaggttctca gaagaaacac
2881 atttcgcctg tacaggcttt aagtgaattc aaagcaatgg attccttcta ggacgatagg
2941 ttttaacaag aaagcttttt ctttcttttc tttctttctt tttcttttta attccatttt
3001 tgtatgcata cctgccagct cgtatgcctc tggcatgggg aaattaaggg aacagtgtct
3061 gtttgcatgt aagatgagat gagatcaata ctactgatcc atctgtagcc tgggaaggag
3121 acaggacatt cctgtactaa ggtggcacag agctgtcctt tgcaacattc tcataaaatt
3181 gggcacagag ttcgcattgg cgcaatattt atgggagtgg gagggatggg gaaaataaac
3241 ttaactctac aaaagcaaac tctaatgcat gcaagaatca ttaggttggc aggtatatgc
3301 ataagtgaaa aatctggaag tgtaatggta gaacataaaa cttgtattgc ttctgtttca
3361 gtgcaaaaat gtactagcca atacgcttaa gtgtgtggcc catgaattga acaatttaac
3421 cttgaagtct atatccgtga tattatgtcg atttttaact gaggggaaat taactagtcc
3481 agcctaaaat gcttctttta atctgcattc tgtttcctct tctagttgtg ccattactag
3541 tgatcatgtt tttttccccc ctttaatgaa aacaataaac atctatttga gacaattaaa
3601 atccttctgg gggcactgga agcacaatac ggtgaccaat cttgctttca tttttttttc
3661 tttttaattt gaaccatgat tttgctagaa atagaaggcc cagtggtgga atattagagg
3721 gaaggaaact gacaacgtgt gaaagttaga ggcaaataca taggtgtagc ttggagtgct
3781 ggtatctaat ataccattgt attcactaac taactcaaaa taaacacatt taatcttgaa
3841 aaaaaaaaaa aaa
//