LOCUS BC052968 4211 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens EPH receptor B3, mRNA (cDNA clone MGC:54077
IMAGE:6472607), complete cds.
ACCESSION BC052968
VERSION BC052968.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33598961.
FEATURES Location/Qualifiers
source 1..4211
/db_xref="H-InvDB:HIT000053843_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54077 IMAGE:6472607"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4211
/gene="EPHB3"
/gene_synonym="HEK2"
/gene_synonym="TYRO6"
/db_xref="GeneID:2049"
/db_xref="HGNC:HGNC:3394"
/db_xref="MIM:601839"
CDS 421..3417
/gene="EPHB3"
/gene_synonym="HEK2"
/gene_synonym="TYRO6"
/codon_start=1
/product="EPH receptor B3"
/protein_id="AAH52968.1"
/db_xref="GeneID:2049"
/db_xref="HGNC:HGNC:3394"
/db_xref="MIM:601839"
/translation="MARARPPPPPSPPPGLLPLLPPLLLLPLLLLPAGCRALEETLMD
TKWVTSELAWTSHPESGWEEVSGYDEAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDV
QRVYVELKFTVRDCNSIPNIPGSCKETFNLFYYEADSDVASASSPFWMENPYVKVDTI
APDESFSRLDAGRVNTKVRSFGPLSKAGFYLAFQDQGACMSLISVRAFYKKCASTTAG
FALFPETLTGAEPTSLVIAPGTCIPNAVEVSVPLKLYCNGDGEWMVPVGACTCATGHE
PAAKESQCRPCPPGSYKAKQGEGPCLPCPPNSRTTSPAASICTCHNNFYRADSDSADS
ACTTVPSPPRGVISNVNETSLILEWSEPRDLGGRDDLLYNVICKKCHGAGGASACSRC
DDNVEFVPRQLGLTERRVHISHLLAHTRYTFEVQAVNGVSGKSPLPPRYAAVNITTNQ
AAPSEVPTLRLHSSSGSSLTLSWAPPERPNGVILDYEMKYFEKSEGIASTVTSQMNSV
QLDGLRPDARYVVQVRARTVAGYGQYSRPAEFETTSERGSGAQQLQEQLPLIVGSATA
GLVFVVAVVVIAIVCLRKQRHGSDSEYTEKLQQYIAPGMKVYIDPFTYEDPNEAVREF
AKEIDVSCVKIEEVIGAGEFGEVCRGRLKQPGRREVFVAIKTLKVGYTERQRRDFLSE
ASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFTVIQLVGMLR
GIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDPSDPTYTSSLGG
KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAVEQDYR
LPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRNAASLKVIASAQSGMSQ
PLLDRTVPDYTTFTTVGDWLDAIKMGRYKESFVSAGFASFDLVAQMTAEDLLRIGVTL
AGHQKKILSSIQDMRLQMNQTLPVQV"
BASE COUNT 803 a 1359 c 1254 g 795 t
ORIGIN
1 gatcccagct cggaccccgg acggcgcgcg cccccgaagc cccggatccc agtcgggccc
61 gcagctgacc gccagattac tgtgcatccc gaatcacgac cacctgcacc ctcctgcccc
121 ggcccgcccc ccaagtcctc aggcacccag ctccccggcg ccccggatcc tcctggaccg
181 gtccgtccag attcccgcgg gaccgacctg tccgcatccc caggaccgcc gggctcggtg
241 caccgcctcg gtcccggagc cgcccgcctg gattgcattc cctcctctcc tggatctcct
301 gggacccgac gcgagcctgc cccggagccc gccgagcgca ccctctctcg ggtgcctgca
361 gccccgccgg cgcggcccgg cccggcgcgg cccggctcgg ctcctagagc tgccacggcc
421 atggccagag cccgcccgcc gccgccgccg tcgccgccgc cggggcttct gccgctgctc
481 cctccgctgc tgctgctgcc gctgctgctg ctgcccgccg gctgccgggc gctggaagag
541 accctcatgg acacaaaatg ggtaacatct gagttggcgt ggacatctca tccagaaagt
601 gggtgggaag aggtgagtgg ctacgatgag gccatgaatc ccatccgcac ataccaggtg
661 tgtaatgtgc gcgagtcaag ccagaacaac tggcttcgca cggggttcat ctggcggcgg
721 gatgtgcagc gggtctacgt ggagctcaag ttcactgtgc gtgactgcaa cagcatcccc
781 aacatccccg gctcctgcaa ggagaccttc aacctcttct actacgaggc tgacagcgat
841 gtggcctcag cctcctcccc cttctggatg gagaacccct acgtgaaagt ggacaccatt
901 gcacccgatg agagcttctc gcggctggat gccggccgtg tcaacaccaa ggtgcgcagc
961 tttgggccac tttccaaggc tggcttctac ctggccttcc aggaccaggg cgcctgcatg
1021 tcgctcatct ccgtgcgcgc cttctacaag aagtgtgcat ccaccaccgc aggcttcgca
1081 ctcttccccg agaccctcac tggggcggag cccacctcgc tggtcattgc tcctggcacc
1141 tgcatcccta acgccgtgga ggtgtcggtg ccactcaagc tctactgcaa cggcgatggg
1201 gagtggatgg tgcctgtggg tgcctgcacc tgtgccaccg gccatgagcc agctgccaag
1261 gagtcccagt gccgcccctg tccccctggg agctacaagg cgaagcaggg agaggggccc
1321 tgcctcccat gtccccccaa cagccgtacc acctccccag ccgccagcat ctgcacctgc
1381 cacaataact tctaccgtgc agactcggac tctgcggaca gtgcctgtac caccgtgcca
1441 tctccacccc gaggtgtgat ctccaatgtg aatgaaacct cactgatcct cgagtggagt
1501 gagccccggg acctgggtgg ccgggatgac ctcctgtaca atgtcatctg caagaagtgc
1561 catggggctg gaggggcctc agcctgctca cgctgtgatg acaacgtgga gtttgtgcct
1621 cggcagctgg gcctgacgga gcgccgggtc cacatcagcc atctgctggc ccacacgcgc
1681 tacacctttg aggtgcaggc ggtcaacggt gtctcgggca agagccctct gccgcctcgt
1741 tatgcggccg tgaatatcac cacaaaccag gctgccccgt ctgaagtgcc cacactacgc
1801 ctgcacagca gctcaggcag cagcctcacc ctatcctggg cacccccaga gcggcccaac
1861 ggagtcatcc tggactacga gatgaagtac tttgagaaga gcgagggcat cgcctccaca
1921 gtgaccagcc agatgaactc cgtgcagctg gacgggcttc ggcctgacgc ccgctatgtg
1981 gtccaggtcc gtgcccgcac agtagctggc tatgggcagt acagccgccc tgccgagttt
2041 gagaccacaa gtgagagagg ctctggggcc cagcagctcc aggagcagct tcccctcatc
2101 gtgggctccg ctacagctgg gcttgtcttc gtggtggctg tcgtggtcat cgctatcgtc
2161 tgcctcagga agcagcgaca cggctctgat tcggagtaca cggagaagct gcagcagtac
2221 attgctcctg gaatgaaggt ttatattgac ccttttacct acgaggaccc taatgaggct
2281 gttcgggagt ttgccaagga gatcgacgtg tcctgcgtca agatcgagga ggtgatcgga
2341 gctggggaat ttggggaagt gtgccgtggt cgactgaaac agcctggccg ccgagaggtg
2401 tttgtggcca tcaagacgct gaaggtgggc tacaccgaga ggcagcggcg ggacttccta
2461 agcgaggcct ccatcatggg tcagtttgat caccccaata taatccggct cgagggcgtg
2521 gtcaccaaaa gtcggccagt tatgatcctc actgagttca tggaaaactg cgccctggac
2581 tccttcctcc ggctcaacga tgggcagttc acggtcatcc agctggtggg catgttgcgg
2641 ggcattgctg ccggcatgaa gtacctgtcc gagatgaact atgtgcaccg cgacctggct
2701 gctcgcaaca tccttgtcaa cagcaacctg gtctgcaaag tctcagactt tggcctctcc
2761 cgcttcctgg aggatgaccc ctccgatcct acctacacca gttccctggg cgggaagatc
2821 cccatccgct ggactgcccc agaggccata gcctatcgga agttcacttc tgctagtgat
2881 gtctggagct acggaattgt catgtgggag gtcatgagct atggagagcg accctactgg
2941 gacatgagca accaggatgt catcaatgcc gtggagcagg attaccggct gccaccaccc
3001 atggactgtc ccacagcact gcaccagctc atgctggact gctgggtgcg ggaccggaac
3061 ctcaggccca aattctccca gattgtcaat accctggaca agctcatccg caatgctgcc
3121 agcctcaagg tcattgccag cgctcagtct ggcatgtcac agcccctcct ggaccgcacg
3181 gtcccagatt acacaacctt cacgacagtt ggtgattggc tggatgccat caagatgggg
3241 cggtacaagg agagcttcgt cagtgcgggg tttgcatctt ttgacctggt ggcccagatg
3301 acggcagaag acctgctccg tattggggtc accctggccg gccaccagaa gaagatcctg
3361 agcagtatcc aggacatgcg gctgcagatg aaccagacgc tgcctgtgca ggtctgacac
3421 cggctcccac ggggaccctg aggaccgtgc agggatgcca agcagccggc tggactttcg
3481 gactcttgga cttttggatg cctggcctta ggctgtggcc cagaagctgg aagtttggga
3541 aaggcccaag ctgggacttc tccaggcctg tgttccctcc ccaggaagtg cgccccaaac
3601 ctcttcatat tgaagatgga ttaggagagg gggtgatgac ccctccccaa gcccctcagg
3661 gcccagacct tcctgctctc cagcagggga tccccacaac ctcacacttg tctgttcttc
3721 agtgctggag gtcctggcag ggtcaggctg gggtaagccg gggttccaca gggcccagcc
3781 ctggcagggg tctggccccc caggtaggcg gagagcagtc cctccctcag gaactggagg
3841 aggggactcc aggaatgggg aaatgtgaca ccaccatcct gaagccagct tgcacctcca
3901 gtttgcacag ggatttgttc tgggggctga gggccctgtc cccacccccg cccttggtgc
3961 tgtcataaaa gggcaggcag gggcaggctg aggagttgcc ctttgccccc cagagactga
4021 ctctcagagc cagagatggg atgtgtgagt gtgtgtgtgt gtgtgtgtgc gcgcgcgcgc
4081 gtgtgtgtgt gcacgcactg gcctgcacag agagcatggg tgagcgtgta aaagcttggc
4141 cctgtgccct acaatggggc cagctgggcc gacagcagaa taaaggcaat aagatgaaaa
4201 aaaaaaaaaa a
//