LOCUS BC052602 1237 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens carbonic anhydrase XIII, mRNA (cDNA clone MGC:59868
IMAGE:6083105), complete cds.
ACCESSION BC052602
VERSION BC052602.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1237)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1237)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348435.
FEATURES Location/Qualifiers
source 1..1237
/db_xref="H-InvDB:HIT000053811"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59868 IMAGE:6083105"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1237
/gene="CA13"
/gene_synonym="CAXIII"
/gene_synonym="FLJ37995"
/gene_synonym="MGC59868"
/db_xref="GeneID:377677"
/db_xref="HGNC:HGNC:14914"
CDS 303..1091
/gene="CA13"
/gene_synonym="CAXIII"
/gene_synonym="FLJ37995"
/gene_synonym="MGC59868"
/codon_start=1
/product="carbonic anhydrase XIII"
/protein_id="AAH52602.1"
/db_xref="GeneID:377677"
/db_xref="HGNC:HGNC:14914"
/translation="MSRLSWGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSS
LRPLSIKYDPSSAKIISNSGHSFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSAD
DHGSEHIVDGVSYAAELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQK
ITDTLDSIKEKGKQTRFTNFDLLSLLPPSWDYWTYPGSLTVPPLLESVTWIVLKQPIN
ISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQPLKGRKVRASFH"
BASE COUNT 313 a 362 c 264 g 298 t
ORIGIN
1 atcccccccg gaaacctttc tctctccgtc tctccctcta actcaaatct ctcattcccg
61 agtccaaact aagagagact cgcgccccag gagtcagcca gcggcgcggg cgccttcccc
121 gcacgcctct gccgtctgga ggacgcaggc gggagcgccc cggaccgggt tcacggtctc
181 gcactcctgc cgccggcgcc ccgcggtccc gccctagcag gctccttccc gggcccctcc
241 ccgctccctc ctctttctcg ctgctcagtc acatctttct cttccttcca ccccgaggga
301 ccatgtcgag gctcagctgg ggataccgcg agcacaacgg tcctattcac tggaaggaat
361 ttttccctat tgctgatggt gatcagcaat ctccaattga gattaaaacc aaagaagtga
421 aatatgactc ttccctccga ccacttagta tcaagtatga cccaagctca gctaaaatca
481 tcagcaacag cggccattcc ttcaatgttg actttgatga cacagagaac aaatcagttc
541 tgcgtggtgg tcctctcact ggaagctaca ggttacggca ggttcacctt cactgggggt
601 ccgctgatga ccacggctcc gagcacatag tagatggagt gagctatgct gcagagctcc
661 atgttgttca ctggaattca gacaaatacc ccagctttgt tgaggcagct catgaaccag
721 atggactggc tgtcttggga gtgtttttac agattggtga acctaattcc caactgcaaa
781 agattactga cactttggat tccattaaag aaaagggtaa acaaactcga ttcacaaatt
841 ttgacctatt gtctctgctt ccaccatcct gggactactg gacatatcct ggttctctta
901 cagttccacc tcttcttgag agtgtcacat ggattgtttt aaagcaacct ataaacatca
961 gctctcaaca gctggccaaa tttcgcagtc tcctgtgcac agcggagggt gaagcagcag
1021 cttttctggt gagcaatcac cgcccaccac agcctctaaa gggccgcaaa gtgagagcct
1081 ctttccatta aaaattgtca ccaatgaact cccccaaaca tggctgtgga gagacaacaa
1141 aacaaaacaa agcacaaaag tctctgccaa caactctttt gtggaattct aatttatagg
1201 aaacatttta gtatgagctt cagtgtcaca aaaaaaa
//