LOCUS BC052305 2609 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with SH3 domain, ankyrin repeat and PH domain
3, mRNA (cDNA clone IMAGE:6377039), partial cds.
ACCESSION BC052305
VERSION BC052305.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2609)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2609)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: l Column: 24.
FEATURES Location/Qualifiers
source 1..2609
/db_xref="H-InvDB:HIT000099508"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6377039"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2609
/gene="ASAP3"
/gene_synonym="ACAP4"
/gene_synonym="CENTB6"
/gene_synonym="UPLC1"
/db_xref="GeneID:55616"
/db_xref="HGNC:HGNC:14987"
CDS <1..1276
/gene="ASAP3"
/gene_synonym="ACAP4"
/gene_synonym="CENTB6"
/gene_synonym="UPLC1"
/codon_start=2
/product="ASAP3 protein"
/protein_id="AAH52305.1"
/db_xref="GeneID:55616"
/db_xref="HGNC:HGNC:14987"
/translation="SLTLDLLGPSELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESD
MGTRRDYIMAKYVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPD
AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK
LLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVISTE
PGSDSEEDEEEKRCLLKLPAQAHWASGRLDISNKTYETVASLGAATPQGESEDCPPPL
PVKNSSRTLVQGCARHASGDRSEVSSLSSEAPETPESLGSPASSSSLMSPLEPGDPSQ
APPNSEEGLREPPGTSRPSLTSGTTPSEMYLPVRFSSESTRSYRRGARSPEDGPSARQ
PLPRRNVPVGITEGDGSRTGSLPASSVQLLQD"
BASE COUNT 605 a 729 c 698 g 577 t
ORIGIN
1 gtcactcacc ttggacctgc tgggcccctc cgagttgttg ctggccttga acatgggaaa
61 cacgagcttc aatgaggtca tggaggccca gctaccctca cacggcggcc ctaaaccctc
121 agctgagagt gacatgggca cccgcaggga ctacattatg gccaagtatg tggagcatag
181 gtttgcacgc cggtgcacac ctgagcctca gcgactctgg acagccattt gcaacaggga
241 cctcctgtcg gtactggagg cctttgccaa tgggcaggac tttggacagc cgctgccagg
301 gcctgatgca caggcacctg aagaactcgt cttgcatttg gctgtcaaag tcgccaacca
361 ggcttccctg cctctggtgg atttcatcat ccagaacggt ggtcacctgg atgccaaggc
421 tgctgacggg aacacggctc tgcactacgc agcactctac aaccagcccg actgcctcaa
481 gctgctgctg aaggggagag ctttggttgg cacagtaaat gaagcaggcg agacagctct
541 ggacatagcc aggaagaagc accacaagga gtgtgaggag ctgctggagc aggcccaggc
601 ggggaccttt gccttccctc tacatgtgga ctactcctgg gtaatttcca cagagcctgg
661 ctctgacagt gaggaggatg aggaagagaa gcgctgcttg ctgaagctcc cggcccaggc
721 tcactgggcc agtgggaggc tggacatcag caacaagacc tatgagactg tcgccagcct
781 gggagcagcc acccctcagg gcgagagtga ggactgtccc ccgcccttgc cagtcaaaaa
841 ctcttctcgg actttggtcc aagggtgtgc aagacatgcc agtggagatc gttctgaagt
901 ctccagcctg agttcagagg cccctgagac ccctgagagc ctgggcagtc cagcctcctc
961 ctccagtctg atgagcccct tggaacctgg ggatcccagc caagccccac ccaactctga
1021 agagggcctc cgagagcccc caggcacctc cagacccagc ctgacatccg ggaccacccc
1081 ttcggagatg tacctccccg tcagattcag ctccgagagc actcgctcct atcggcgggg
1141 ggcgcggagc cctgaagatg gtccctcagc caggcagcct ctgcccagaa ggaacgtgcc
1201 ggttggcatc actgaaggag atggctcaag gactgggagt ctcccagcaa gttctgtgca
1261 acttttgcaa gactagctcc ttgctggccc ccacatgccc catgctaggc cccaatgttc
1321 agagctggga cttgagctca caaaactggg gagctgagac atttgttctc ttggatctca
1381 ctctctctgt cccttgtgcc tctgtagctg gccttcttcc tgccacaggc catgcctcta
1441 ccaaggacac atggcctttc cctgttaggg ctgatggcgg ttctttccta tctcattacc
1501 cgctaggggc ctgggagccc tgtggctgga tctgagtgct cctgagctgg cttcagctgc
1561 agaactctca gtccctcatc agatcgagac tctatttccc ccgtcagtct gggggcttca
1621 caagggcagg agagccctcc atcactgact tccagatcag ggaccctgcc aagtagggac
1681 tgtcttctca gccagccatt tattagtcta atattccttc actaaattcc aactctatgt
1741 ctggacctgt gttaggcact tcagatacca cacgagtaag acaagggccc tgcaggggtg
1801 gtcctttggt ggaaagctgg tcttaagggt tgggcttggg aataggcagg gtcagattcc
1861 agggcatggc tctggactca gctggtttat acctatatga ccattacagt tgtctacaga
1921 tcacatccat tctggctggt caacatgcat gctgtactgg ctgttaaata aaaatattct
1981 gaatgtcact ccttttgagg gacagcacag ccttccctag gcattctcct atattcccca
2041 gccaaattgt agagtcagat gcacccacat ttgcctgtgt ccttgattta gcaggaagga
2101 aaggaatagt cggggttgat ggatgcccac ttctcttctc tttctcttgg tcaactcagg
2161 agccttttag tctgagggaa tggagaggca aagaaagaag ggagagtaat agaattggga
2221 gggcagagac ttaagggttc tgcttcccag ccctagaaat tctatcattg ctcagcccca
2281 atgagaaagc agatacacct aagccatcat caaccactaa catctcaact tgccagttgc
2341 tgggtgctgg gccctggcag gaatgggcca agccaagcag gggagactag agagcaccaa
2401 tggccaacac agctgcctgg ctggggaggc tgtgctgttt cccctggaga cctgactggt
2461 ctgtggttcc cacaggaaca gggttgtctt ttgagccccc agtgtctggt ttcattcatc
2521 tcagacttgt tatttcactc atctctaata aaggattggg gggtcagtta aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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