LOCUS BC052270 1648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member
10d, decoy with truncated death domain, mRNA (cDNA clone MGC:59639
IMAGE:6572696), complete cds.
ACCESSION BC052270
VERSION BC052270.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544227.
FEATURES Location/Qualifiers
source 1..1648
/db_xref="H-InvDB:HIT000053761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59639 IMAGE:6572696"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1648
/gene="TNFRSF10D"
/gene_synonym="CD264"
/gene_synonym="DCR2"
/gene_synonym="TRAILR4"
/gene_synonym="TRUNDD"
/db_xref="GeneID:8793"
/db_xref="HGNC:HGNC:11907"
/db_xref="MIM:603614"
CDS 84..1244
/gene="TNFRSF10D"
/gene_synonym="CD264"
/gene_synonym="DCR2"
/gene_synonym="TRAILR4"
/gene_synonym="TRUNDD"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 10d, decoy with truncated death domain"
/protein_id="AAH52270.1"
/db_xref="GeneID:8793"
/db_xref="HGNC:HGNC:11907"
/db_xref="MIM:603614"
/translation="MGLWGQSVPTASSARAGRYPGARTASGTRPWLLDPKILKFVVFI
VAVLLPVRVDSATIPRQDEVPQQTVAPQQQRRSLKEEECPAGSHRSEYTGACNPCTEG
VDYTIASNNLPSCLLCTVCKSGQTNKSSCTTTRDTVCQCEKGSFQDKNSPEMCRTCRT
GCPRGMVKVSNCTPRSDIKCKNESAASSTGKTPAAEETVTTILGMLASPYHYLIIIVV
LVIILAVVVVGFSCRKKFISYLKGICSGGGGGPERVHRVLFRRRSCPSRVPGAEDNAR
NETLSNRYLQPTQVSEQEIQGQELAELTGVTVESPEEPQRLLEQAEAEGCQRRRLLVP
VNDADSADISTLLDASATLEEGHAKETIQDQLVGSEKLFYEEDEAGSATSCL"
BASE COUNT 431 a 415 c 429 g 373 t
ORIGIN
1 gcgagaacct ttgcacgcgc acaaactacg gggacgattt ctgattgatt tttggcgctt
61 tcgatccacc ctcctccctt ctcatgggac tttggggaca aagcgtcccg accgcctcga
121 gcgctcgagc agggcgctat ccaggagcca ggacagcgtc gggaaccaga ccatggctcc
181 tggaccccaa gatccttaag ttcgtcgtct tcatcgtcgc ggttctgctg ccggtccggg
241 ttgactctgc caccatcccc cggcaggacg aagttcccca gcagacagtg gccccacagc
301 aacagaggcg cagcctcaag gaggaggagt gtccagcagg atctcataga tcagaatata
361 ctggagcctg taacccgtgc acagagggtg tggattacac cattgcttcc aacaatttgc
421 cttcttgcct gctatgtaca gtttgtaaat caggtcaaac aaataaaagt tcctgtacca
481 cgaccagaga caccgtgtgt cagtgtgaaa aaggaagctt ccaggataaa aactcccctg
541 agatgtgccg gacgtgtaga acagggtgtc ccagagggat ggtcaaggtc agtaattgta
601 cgccccggag tgacatcaag tgcaaaaatg aatcagctgc cagttccact gggaaaaccc
661 cagcagcgga ggagacagtg accaccatcc tggggatgct tgcctctccc tatcactacc
721 ttatcatcat agtggtttta gtcatcattt tagctgtggt tgtggttggc ttttcatgtc
781 ggaagaaatt catttcttac ctcaaaggca tctgctcagg tggtggagga ggtcccgaac
841 gtgtgcacag agtccttttc cggcggcgtt catgtccttc acgagttcct ggggcggagg
901 acaatgcccg caacgagacc ctgagtaaca gatacttgca gcccacccag gtctctgagc
961 aggaaatcca aggtcaggag ctggcagagc taacaggtgt gactgtagag tcgccagagg
1021 agccacagcg tctgctggaa caggcagaag ctgaagggtg tcagaggagg aggctgctgg
1081 ttccagtgaa tgacgctgac tccgctgaca tcagcacctt gctggatgcc tcggcaacac
1141 tggaagaagg acatgcaaag gaaacaattc aggaccaact ggtgggctcc gaaaagctct
1201 tttatgaaga agatgaggca ggctctgcta cgtcctgcct gtgaaagaat ctcttcagga
1261 aaccagagct tccctcattt accttttctc ctacaaaggg aagcagcctg gaagaaacag
1321 tccagtactt gacccatgcc ccaacaaact ctactatcca atatggggca gcttaccaat
1381 ggtcctagaa ctttgttaac gcacttggag taatttttat gaaatactgc gtgtgataag
1441 caaacgggag aaatttatat cagattcttg gctgcatagt tatacgattg tgtattaagg
1501 gtcgttttag gccacatgcg gtggctcatg cctgtaatcc cagcactttg ataggctgag
1561 gcaggtggat tgcttgagct cgggagtttg agaccagcct catcaacaca gtgaaactcc
1621 atctcaattt aaaaaaaaaa aaaaaaaa
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