LOCUS BC052251 5257 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class V, type 10A, mRNA (cDNA clone MGC:59648
IMAGE:6258931), complete cds.
ACCESSION BC052251
VERSION BC052251.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5257)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5257)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361906.
FEATURES Location/Qualifiers
source 1..5257
/db_xref="H-InvDB:HIT000053755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59648 IMAGE:6258931"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..5257
/gene="ATP10A"
/gene_synonym="ATPVA"
/gene_synonym="ATPVC"
/db_xref="GeneID:57194"
/db_xref="HGNC:HGNC:13542"
/db_xref="MIM:605855"
CDS 113..4612
/gene="ATP10A"
/gene_synonym="ATPVA"
/gene_synonym="ATPVC"
/codon_start=1
/product="ATPase, class V, type 10A"
/protein_id="AAH52251.1"
/db_xref="GeneID:57194"
/db_xref="HGNC:HGNC:13542"
/db_xref="MIM:605855"
/translation="MEREPAGTEEPGPPGRRRRREGRTRTVRSNLLPPPGAEDPAAGA
AKGERRRRRGCAQHLADNRLKTTKYTLLSFLPKNLFEQFHRPANVYFVFIALLNFVPA
VNAFQPGLALAPVLFILAITAFRDLWEDYSRHRSDHKINHLGCLVFSREEKKYVNRFW
KEIHVGDFVRLRCNEIFPADILLLSSSDPDGLCHIETANLDGETNLKRRQVVRGFSEL
VSEFNPLTFTSVIECEKPNNDLSRFRGCIIHDNGKKAGLYKENLLLRGCTLRNTDAVV
GIVIYAGHETKALLNNSGPRYKRSKLERQMNCDVLWCVLLLVCMSLFSAVGHGLWIWR
YQEKKSLFYVPKSDGSSLSPVTAAVYSFLTMIIVLQVLIPISLYVSIEIVKACQVYFI
NQDMQLYDEETDSQLQCRALNITEDLGQIQYIFSDKTGTLTENKMVFRRCTVSGVEYS
HDANAQRLARYQEADSEEEEVVPRGGSVSQRGSIGSHQSVRVVHRTQSTKSHRRTGSR
AEAKRASMLSKHTAFSSPMEKDITPDPKLLEKVSECDKSLAVARHQEHLLAHLSPELS
DVFDFFIALTICNTVVVTSPDQPRTKVRVRFELKSPVKTIEDFLRRFTPSCLTSGCSS
IGSLAANKSSHKLGSSFPSTPSSDGMLLRLEERLGQPTSAIASNGYSSQADNWASELA
QEQESERELRYEAESPDEAALVYAARAYNCVLVERLHDQVSVELPHLGRLTFELLHTL
GFDSVRKRMSVVIRHPLTDEINVYTKGADSVVMDLLQPCSSVDARGRHQKKIRSKTQN
YLNVYAAEGLRTLCIAKRVLSKEEYACWLQSHLEAESSLENSEELLFQSAIRLETNLH
LLGATGIEDRLQDGVPETISKLRQAGLQIWVLTGDKQETAVNIAYACKLLDHDEEVIT
LNATSQEACAALLDQCLCYVQSRGLQRAPEKTKGKVSMRFSSLCPPSTSTASGRRPSL
VIDGRSLAYALEKNLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIG
DGANDVSMIQVADVGVGISGQEGMQAVMASDFAVPKFRYLERLLILHGHWCYSRLANM
VLYFFYKNTMFVGLLFWFQFFCGFSASTMIDQWYLIFFNLLFSSLPPLVTGVLDRDVP
ANVLLTNPQLYKSGQNMEEYRPRTFWFNMADAAFQSLVCFSIPYLAYYDSNVDLFTWG
TPIVTIALLTFLLHLGIETKTWTWLNWITCGFSVLLFFTVALIYNASCATCYPPSNPY
WTMQALLGDPVFYLTCLMTPVAALLPRLFFRSLQGRVFPTQLQLARQLTRKSPRRCSA
PKETFAQGRLPKDSGTEHSSGRTVKTSVPLSQPSWHTQQPVCSLEASGEPSTVDMSMP
VREHTLLEGLSAPAPMSSAPGEAVLRSPGGCPEESKVRAASTGRVTPLSSLFSLPTFS
LLNWISSWSLVSRLGSVLQFSRTEQLADGQAGRGLPVQPHSGRSGLQGPDHRLLIGAS
SRRSQ"
BASE COUNT 1219 a 1466 c 1463 g 1109 t
ORIGIN
1 ccgcaggcgg ggagctcgca ccgccgcgcc cgggccgcga gtgatgataa cctaagaggc
61 cggcgcgggc gggcgtgagc ggcggaggag ccgggcgcgg cgacacgcgg ccatggagcg
121 ggagccggcg gggaccgagg agcccgggcc tccgggacgg cggaggcgcc gagagggcag
181 gacgcgcacg gtgcgctcca acctgctgcc gcccccgggc gccgaggacc ctgcggctgg
241 cgcggccaag ggcgagcggc gacggcggcg cgggtgtgcc cagcacctgg ccgacaaccg
301 gctcaagact accaagtaca cgctgctgtc cttcctgccc aagaacctgt tcgagcagtt
361 ccaccgcccg gccaacgtgt actttgtctt catcgcgctg ctcaacttcg tgccggcggt
421 gaacgccttc cagcccggcc tggcactggc gccggtgctc ttcatcctgg ccatcacggc
481 cttcagggac ctgtgggagg actacagccg ccaccgctcc gaccacaaga tcaaccacct
541 gggctgcctg gtcttcagca gggaagaaaa gaaatacgtg aaccgattct ggaaagaaat
601 ccacgtggga gactttgtgc gtcttcgctg caacgaaatc ttccctgcgg acattctgct
661 gctctcctcc agtgaccccg acgggctatg ccacatcgag accgccaacc tggatggaga
721 gaccaacctg aagcggcggc aggtggtccg cggcttctcg gagcttgtct ccgaattcaa
781 tcctttgacg ttcaccagcg tgatcgaatg cgagaagcca aacaacgacc tgagtaggtt
841 tcgcggctgc atcatacatg acaacgggaa aaaggccggg ctgtataaag aaaacctgct
901 gctgaggggc tgcaccctta ggaacacgga cgcagtcgtc ggcattgtca tctacgcagg
961 acatgaaacc aaggctctgc tgaacaacag tgggccccgc tacaagcgca gcaagctgga
1021 gaggcagatg aactgcgacg tgctctggtg tgtcctgctc cttgtttgca tgtctctgtt
1081 ttcagcagtc ggacatggac tgtggatatg gcggtatcaa gagaagaagt cattatttta
1141 tgtccccaag tctgatggaa gctccttatc cccagtcaca gctgcagttt actcattttt
1201 aacaatgata atagttctgc aggttttgat cccaatttcc ttatacgttt ccattgaaat
1261 tgttaaagca tgccaagtgt acttcattaa ccaggacatg cagttgtatg acgaagaaac
1321 agactcgcag ctgcagtgcc gagctctgaa catcacggaa gacttaggac agatacagta
1381 cattttctca gataaaactg gcactttgac agagaataag atggttttcc gaagatgcac
1441 tgtgtctggt gtagaatatt ctcatgatgc aaatgcgcag cgtctggcca ggtaccaaga
1501 ggcagactcg gaggaggagg aggtggtgcc cagagggggc tcggtgtccc agcgcggcag
1561 catcggcagc caccagagtg tccgggtggt gcacagaacc cagagcacca agtcccaccg
1621 gcgcacgggc agccgggccg aggccaagag ggccagcatg ctgtccaagc acacggcctt
1681 cagcagcccc atggagaagg atatcacgcc cgacccaaag ctgctggaga aggtgagtga
1741 gtgtgacaag agcctagccg tggcgaggca tcaggagcac ctgctggccc acctctcgcc
1801 cgagctgtct gacgtctttg atttcttcat cgcactcacc atctgcaaca cagtcgtcgt
1861 cacgtccccg gatcagccac gaacaaaggt gagggtgagg tttgagctga agtccccggt
1921 gaagacgata gaagacttcc tgcggaggtt cacacccagc tgcctgacct caggctgcag
1981 cagcatcggg agcctggccg ccaacaagtc cagccacaag ttgggctcca gcttcccgtc
2041 caccccgtcc agcgacggca tgcttctcag gctggaggag aggctgggcc agcccacctc
2101 ggccatcgcc agcaacggct acagcagcca ggcggacaac tgggcctcgg agcttgctca
2161 ggagcaggag tcagagcgcg agctgcggta cgaggcggag agcccggatg aggccgcact
2221 ggtgtatgcg gccagagcct acaactgcgt gcttgtggag cggctgcacg accaagtgtc
2281 agtggagctg ccccacctgg gcaggctcac cttcgagctc ctgcacacac tgggtttcga
2341 ttccgtccgc aagaggatgt cagtggtgat ccggcacccg cttaccgatg agatcaacgt
2401 ctacaccaag ggggccgact cagtggtcat ggatctcctg cagccctgct cttcagttga
2461 cgccagaggg aggcatcaaa aaaagattcg gagcaaaact cagaattacc tcaacgtgta
2521 tgcggcggaa ggcctgcgca ccttgtgcat cgccaagaga gttctgagta aagaagagta
2581 tgcctgctgg ttgcaaagcc acctagaagc cgaatcctcc ctggaaaaca gcgaggagct
2641 cctcttccag tctgccattc gcctggagac caacctgcac ttgttaggtg ccactgggat
2701 tgaagaccgc ctgcaggacg gagtccctga aactatttct aaattgcgtc aagcgggcct
2761 gcagatttgg gttctcactg gtgacaaaca agaaacagct gtcaacattg catatgcctg
2821 caaactgctg gaccacgacg aggaggtcat caccctgaat gccacctccc aggaggcgtg
2881 tgcagccctg ctagaccagt gcctatgcta cgtgcagtcc agaggcctcc agagagcccc
2941 tgagaagacc aagggcaaag tgagcatgag gttctcctct ctctgcccac cctccacgtc
3001 cactgcctct ggccgcagac ccagcctcgt gatcgatggg agaagcctgg cctacgctct
3061 cgagaaaaac ctggaggaca aattcctctt ccttgccaag cagtgccgct ccgtcctctg
3121 ctgtcggtcg acgcctctgc agaagagcat ggtggtgaag ctggtgcgga gcaagctcaa
3181 ggccatgacc ctggccatag gtgatggagc caatgatgtc agcatgatcc aggtggcaga
3241 tgtgggtgtg ggaatctccg gccaggaggg tatgcaggca gtgatggcca gcgactttgc
3301 agtgccgaaa ttccgatacc tggagaggct cttgattctt cacgggcatt ggtgctactc
3361 ccgacttgcc aacatggtgc tgtacttctt ctacaaaaac acaatgttcg tgggcctcct
3421 gttttggttc cagtttttct gtggcttctc tgcatctacc atgattgacc agtggtatct
3481 aatcttcttt aatctgctct tctcgtcact tcccccgctc gtgactgggg tgctggacag
3541 ggatgtgcca gccaatgtgc tgctgaccaa cccgcagctc tacaagagtg gccagaacat
3601 ggaggaatac cggccacgaa cgttctggtt taacatggcc gacgccgcct tccagagcct
3661 ggtttgcttt tccattcctt acctggccta ctatgactcg aacgtggacc tgtttacctg
3721 ggggacccct attgtgacaa tcgcgctgct cactttcctg ctccacctgg gcattgaaac
3781 caaaacctgg acctggctca actggataac gtgtggcttc agtgtccttt tgtttttcac
3841 cgtggctttg atttacaatg cgtcttgtgc cacgtgctat cctccgtcca acccttactg
3901 gactatgcaa gccttactgg gtgacccagt gttttacttg acttgcctga tgacgcctgt
3961 cgctgcactg ctgcccagat tgtttttcag atccctccag gggagggttt tccccacaca
4021 acttcagctg gcacgtcagt tgaccaggaa gtcccccagg agatgcagtg ctcccaaaga
4081 gacctttgct cagggacgcc tcccgaagga ctcgggaacc gagcactcat cagggaggac
4141 agtcaagacc tctgtgcccc tgtcccagcc ttcttggcac acacagcagc cggtctgctc
4201 cctggaggcc agcggggagc ccagcacagt ggacatgagc atgccagtga gggagcacac
4261 cctgctggag gggctgagcg caccggcccc catgtcctct gcgccagggg aggctgtcct
4321 gaggagtcca ggagggtgtc ctgaggagtc caaggtgaga gctgccagca ccggcagggt
4381 gacccccctg tcttccctct tcagcctgcc taccttcagc ttactcaact ggatttcctc
4441 ctggtcgctg gtcagcaggc tggggagtgt cttacagttc tcccggacgg agcagcttgc
4501 agatggacaa gcgggacgtg gacttcctgt ccagccccac tcaggccgat caggacttca
4561 agggccagac cacagactac ttataggagc atcttcaagg cggtcacagt gaaaaccttg
4621 aaatggcctt ttttaatata tataaataaa tgttaatatt atttatgttt attatttgca
4681 cagaagagtt ctagggagat gtatttctaa atgtttccca ggctaataca ggaaacaaga
4741 ggtaccaaaa aagaaagttt attttttaaa attctaagta gagtatattg aaaagaaaaa
4801 gaagagcctt aacatatata aaagtttaaa gaagagtaac acttgaaaag tgtgtttaga
4861 tttatttttt catctcattt ttaagaacaa gcagtacgat ttgttttctt caacatgtgt
4921 gactgcgcac tgagtacaaa tgtgtgactg ctcatggtta atgcaggcag gtgtgaacat
4981 gggggaacaa tgagcagaga tggcagaggg cagagcacat ggcccccaga ggcttccagt
5041 ctcactgaca caggagggct gggctccact tcatccagat gaaggaaagg aagacctcaa
5101 gaaaaattca cagttgagtg catcccagca ttctgttccg ggcaggcatt tcaggaagac
5161 cgccttgtag gtattacatc cctggtgtcg tattttgcct gttaaatcgt aacaagcaat
5221 aaacaacttt cactttgcaa aaaaaaaaaa aaaaaaa
//