LOCUS BC052211 1660 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens thymidine phosphorylase, mRNA (cDNA clone MGC:34335
IMAGE:5174407), complete cds.
ACCESSION BC052211
VERSION BC052211.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1660)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 2, 2003 this sequence version replaced BC052211.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7669488.
FEATURES Location/Qualifiers
source 1..1660
/db_xref="H-InvDB:HIT000053748"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34335 IMAGE:5174407"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1660
/gene="TYMP"
/gene_synonym="hPD-ECGF"
/gene_synonym="PDECGF"
/gene_synonym="TP"
/db_xref="GeneID:1890"
/db_xref="HGNC:HGNC:3148"
/db_xref="MIM:131222"
CDS 142..1590
/gene="TYMP"
/gene_synonym="hPD-ECGF"
/gene_synonym="PDECGF"
/gene_synonym="TP"
/codon_start=1
/product="TYMP protein"
/protein_id="AAH52211.1"
/db_xref="GeneID:1890"
/db_xref="HGNC:HGNC:3148"
/db_xref="MIM:131222"
/translation="MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKR
DGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQL
EWPEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLES
IPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASI
LSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKP
LGRCVGHALEVEEALLCMDGAGPPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAAL
DDGSALGRFERMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELV
RALPLALVLHELGAGRSRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGPALSGP
QSRALQEALVLSDRAPFAAPLPFAELVLPPQQ"
BASE COUNT 305 a 522 c 596 g 237 t
ORIGIN
1 gcgcgaaccc tgaaccctac ggtcccgacc cgcgggcgag gccgggtacc tgggctggga
61 tccggagcaa gcgggcgagg gcagcgccct aagcaggccg cagaccccgg acgtgtcagg
121 catccccgca ggcccggagc gatggcagcc ttgatgaccc cgggaaccgg ggccccaccc
181 gcgcctggtg acttctccgg ggaagggagc cagggacttc ccgacccttc gccagagccc
241 aagcagctcc cggagctgat ccgcatgaag cgagacggag gccgcctgag cgaagcggac
301 atcaggggct tcgtggccgc tgtggtgaat gggagcgcgc agggcgcaca gatcggggcc
361 atgctgatgg ccatccgact tcggggcatg gatctggagg agacctcggt gctgacccag
421 gccctggctc agtcgggaca gcagctggag tggccagagg cctggcgcca gcagcttgtg
481 gacaagcatt ccacaggggg tgtgggtgac aaggtcagcc tggtcctcgc acctgccctg
541 gcggcatgtg gctgcaaggt gccaatgatc agcggacgtg gtctggggca cacaggaggc
601 accttggata agctggagtc tattcctgga ttcaatgtca tccagagccc agagcagatg
661 caagtgctgc tggaccaggc gggctgctgt atcgtgggtc agagtgagca gctggttcct
721 gcggacggaa tcctatatgc agccagagat gtgacagcca ccgtggacag cctgccactc
781 atcacagcct ccattctcag taagaaactc gtggaggggc tgtccgctct ggtggtggac
841 gttaagttcg gaggggccgc cgtcttcccc aaccaggagc aggcccggga gctggcaaag
901 acgctggttg gcgtgggagc cagcctaggg cttcgggtcg cggcagcgct gaccgccatg
961 gacaagcccc tgggtcgctg cgtgggccac gccctggagg tggaggaggc gctgctctgc
1021 atggacggcg caggcccgcc agacttaagg gacctggtca ccacgctcgg gggcgccctg
1081 ctctggctca gcggacacgc ggggactcag gcccagggcg ctgcccgggt ggccgcggcg
1141 ctggacgacg gctcggccct tggccgcttc gagcggatgc tggcggcgca gggcgtggat
1201 cccggtctgg cccgagccct gtgctcggga agtcccgcag aacgccggca gctgctgcct
1261 cgcgcccggg agcaggagga gctgctggcg cccgcagatg gcaccgtgga gctggtccgg
1321 gcgctgccgc tggcgctggt gctgcacgag ctcggggccg ggcgcagccg cgctggggag
1381 ccgctccgcc tgggggtggg cgcagagctg ctggtcgacg tgggtcagag gctgcgccgt
1441 gggaccccct ggctccgcgt gcaccgggac ggccccgcgc tcagcggccc gcagagccgc
1501 gccctgcagg aggcgctcgt actctccgac cgcgcgccat tcgccgcccc cttgcccttc
1561 gcagagctcg ttctgccgcc gcagcaataa agctcctttg ccgcgaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//