LOCUS BC051896 1597 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vasohibin 1, mRNA (cDNA clone MGC:60334
IMAGE:5170122), complete cds.
ACCESSION BC051896
VERSION BC051896.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1597)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1597)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254856.
FEATURES Location/Qualifiers
source 1..1597
/db_xref="H-InvDB:HIT000053737"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60334 IMAGE:5170122"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1597
/gene="VASH1"
/db_xref="GeneID:22846"
/db_xref="HGNC:HGNC:19964"
/db_xref="MIM:609011"
CDS 225..1322
/gene="VASH1"
/codon_start=1
/product="vasohibin 1"
/protein_id="AAH51896.1"
/db_xref="GeneID:22846"
/db_xref="HGNC:HGNC:19964"
/db_xref="MIM:609011"
/translation="MPGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEE
PEEEGEEDLRDGGVPFFVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLP
KIPIPSVPTFQPSTPVPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEM
TKEALPIKCLEAVILGIYLTNSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGAL
GMSRREDLMYKPPAFRTLSELVLDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWK
HSVLDVERLGRDDFRKELERHARDMRLKIGKGTGPPSPTKDRKKDVSSPQRAQSSPHR
RNSRSERRPSGDKKTSEPKAMPDLNGYQIRV"
BASE COUNT 408 a 472 c 458 g 259 t
ORIGIN
1 ggcctccaag gctgacccca gacaacccac cccctcggac cctaattcac cttattgcac
61 tgattttttt tatcaagtcg tattttattg tacaggagcc acgccctgat ttcttaaagg
121 cgccttgcac tctggccatg tgttatctct gcagccggtg tgtgggaggc ctcttgtgag
181 ccagttgttt tcccgcctcc accacccccc tcgaagattt agggatgcca ggggggaaga
241 aggtggctgg gggtggcagc agcggtgcca ctccaacgtc cgctgcggcc accgccccct
301 ctggggtcag gcgtttggag accagcgaag gaacctcagc ccagagagat gaggagccag
361 aagaggaagg ggaagaggac ctgcgagacg gaggcgtccc cttctttgtc aaccggggtg
421 ggctacctgt ggatgaggcc acctgggaaa ggatgtggaa acacgtggcc aagatccacc
481 ccgatggaga gaaggtggcg caacggatcc gtggggccac agacctgccc aagatcccca
541 taccgagtgt gcctacgttc cagccgtcta cacctgtccc tgagcgcctg gaagctgtgc
601 agcgctacat cagagagctg cagtacaatc acacagggac acagttcttt gaaattaaga
661 agagcagacc tctgacaggg ctgatggacc tggccaagga aatgaccaaa gaggccctgc
721 caatcaaatg cctggaagcc gtgatcctgg gaatttacct caccaacagc atgcccaccc
781 tggagcgctt ccccatcagc ttcaagacct acttctcagg gaactacttc cgccacatcg
841 tgctgggggt gaacttcgcg ggccgctacg gtgcgctggg catgagtcgg cgcgaggacc
901 tgatgtacaa gccgcccgcc ttccgcacgc tcagcgagct cgtgctggac ttcgaggccg
961 cctacggccg ctgctggcac gtgctcaaga aggtgaagct gggccagagc gtgtcacacg
1021 acccgcacag cgtggagcag atcgagtgga agcactcggt gctggacgtg gagcgcctgg
1081 gccgcgatga cttccgcaag gagctggagc gccacgcccg cgacatgcgg ctcaagattg
1141 gcaaagggac gggccctccc tctcccacca aggaccggaa gaaggatgtt tcttccccgc
1201 agcgggccca gtccagcccc caccgcagga acagccgcag tgaaagacgg ccctcgggtg
1261 acaagaagac ttccgagccc aaagccatgc cagaccttaa cgggtaccag atccgggtct
1321 gaggcggatg ccagcacccc aggccccacc cactcttggg ggccaggatc cacctgctgg
1381 aaccagcctt atgcatgggg aaggcggggc tggtgacaag gcagggcaag aggctgcagg
1441 aagagtgtgt tccagctcag ccccccaagc tgctctcgct cccactgagc caagccccct
1501 aactttgggc ctagaggcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//