LOCUS BC051818 2911 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens ras homolog gene family, member T1, mRNA (cDNA clone
IMAGE:6009328), partial cds.
ACCESSION BC051818
VERSION BC051818.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2911)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2911)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: h Column: 21.
FEATURES Location/Qualifiers
source 1..2911
/db_xref="H-InvDB:HIT000099427"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6009328"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2911
/gene="RHOT1"
/gene_synonym="ARHT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/db_xref="GeneID:55288"
CDS <1..1903
/gene="RHOT1"
/gene_synonym="ARHT1"
/gene_synonym="FLJ11040"
/gene_synonym="MIRO-1"
/codon_start=2
/product="RHOT1 protein"
/protein_id="AAH51818.1"
/db_xref="GeneID:55288"
/translation="TSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEA
EQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNK
SDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPE
EKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRK
HISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKI
PPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGPDVNNTVCT
NERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAVTVTRDKKIDL
QKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAINTVYVYGQ
EKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQHFMDSRIPCLIV
AAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPEDH
YRDRLSRDMGHTDRIENLRKIWVFLKTALHVTQADLKSSTFWLRASFGATVFAVLGFA
MYKALLKQR"
BASE COUNT 937 a 532 c 562 g 880 t
ORIGIN
1 gacatcactg attatgtctc tggtcagtga agaatttcca gaagaggttc ctccccgggc
61 agaagaaatc accattccag ctgatgtcac cccagagaga gttccaacac acattgtaga
121 ttactcagaa gcagaacaga gtgatgaaca acttcatcaa gaaatatctc aggctaatgt
181 catctgtata gtgtatgccg ttaacaacaa gcattctatt gataaggtaa caagtcgatg
241 gattcctctc ataaatgaaa gaacagacaa agacagcagg ctgcctttaa tattggttgg
301 gaacaaatct gatctggtgg aatatagtag tatggagacc atccttccta ttatgaacca
361 gtatacagaa atagaaacct gtgtggagtg ttcagcgaaa aacctgaaga acatatcaga
421 gctcttttat tacgcacaga aagctgttct tcatcctaca gggcccctgt actgcccaga
481 ggagaaggag atgaaaccag cttgtataaa agcccttact cgtatattta aaatatctga
541 tcaagataat gatggtactc tcaatgatgc tgaactcaac ttctttcaga ggatttgttt
601 caacactcca ttagctcctc aagctctgga ggatgtcaag aatgtagtca gaaaacatat
661 aagtgatggt gtggctgaca gtgggttgac cctgaaaggt tttctctttt tacacacact
721 ttttatccag agagggagac acgaaactac ttggactgtg cttcgacgat ttggttatga
781 tgatgacctg gatttgacac ctgaatattt gttccccctg ctgaaaatac ctcctgattg
841 cactactgaa ttaaatcatc atgcatattt atttctccaa agcacctttg acaagcatga
901 tttggataga gactgtgctt tgtcacctga tgagcttaaa gatttattta aagttttccc
961 ttacatacct tgggggccag atgtgaataa cacagtttgt accaatgaaa gaggctggat
1021 aacctaccag ggattccttt cccagtggac gctcacgact tatttagatg tacagcggtg
1081 cctggaatat ttgggctatc taggctattc aatattgact gagcaagagt ctcaagcttc
1141 agctgttaca gtgacaagag ataaaaagat agacctgcag aaaaaacaaa ctcaaagaaa
1201 tgtgttcaga tgtaatgtaa ttggagtgaa aaactgtggg aaaagtggag ttcttcaggc
1261 tcttcttgga agaaacttaa tgaggcagaa gaaaattcgt gaagatcata aatcctacta
1321 tgcgattaac actgtttatg tatatggaca agagaaatac ttgttgttgc atgatatctc
1381 agaatcggaa tttctaactg aagctgaaat catttgtgat gttgtatgcc tggtatatga
1441 tgtcagcaat cccaaatcct ttgaatactg tgccaggatt tttaagcaac actttatgga
1501 cagcagaata ccttgcttaa tcgtagctgc aaagtcagac ctgcatgaag ttaaacaaga
1561 atacagtatt tcacctactg atttctgcag gaaacacaaa atgcctccac cacaagcctt
1621 cacttgcaat actgctgatg cccccagtaa ggatatcttt gttaaattga caacaatggc
1681 catgtatcca gaggatcatt acagagacag actctcccga gacatgggcc acactgatag
1741 aatagagaat ttgagaaaaa tctgggtctt tctaaaaact gctttgcacg tgacacaagc
1801 tgacctcaag agctccacgt tttggcttcg agcaagtttt ggtgctactg tttttgcagt
1861 tttgggcttt gctatgtaca aagcattatt gaaacagcga tgatataaaa agaaatactg
1921 tccctaccaa aaacaaatac ttttatgtac attctgaatg ctttaagttc tgctagaatt
1981 attgagatat ttatacatgc agagttactt tattaatatt tgtaattcat gcataagagt
2041 attttaatga tagttataac tgcagtattg gctagcatat ggaaagaaaa cagctaacag
2101 ccaaactaaa atggctaaat tccagaggcc aaaagggaat attttgtaaa tatatgtaca
2161 tattcaggca agatatggtc tcccaagctg agttctagaa atgatgtttc tagacatttc
2221 taagtggtat tgttagtgct cacttggctc actcttctag gtttaagtta gcccagagat
2281 tgtatttact catggatcac tttatttatt tcacatttac tcagaatgat cctttgggtt
2341 ctataaggac ataaggtaca atttgccatt gtctctccat ttttaaaaac atacaagtca
2401 gtgtcagctt accaacatga cattttttca gtcagttgtg gtaggccagc cttgaagcca
2461 tcgcacagtc tagaaacttg tgtagctgag tgtgcagctc acctttaagg gtgaagttag
2521 gtaaaagcaa ttagcagagg cgttatctat gtgattatgt tgcttccttg tcagtatgtt
2581 gaattttata gccctttcaa tgaaataaaa aaaaaatttg tatattacca atgtttttag
2641 tttaaataaa gagtcaccct tactactgtt gaatttcatc ccaagtgtaa atcattctat
2701 aatggctgtg tctgttatag tatattacag taactgcatg tgtcaccaag tgttctatat
2761 caggctagga taacctagag gcagtaattt tttaaatgat aaaataaatc taatgaatat
2821 aaactctcat gataaaccta ttttttccat catcagcctt ttcaagtatt taaataaata
2881 actgctgtgt actgtgaaaa aaaaaaaaaa a
//