LOCUS BC051800 5264 bp mRNA linear HUM 06-OCT-2006
DEFINITION Homo sapiens clathrin, heavy chain (Hc), mRNA (cDNA clone MGC:57689
IMAGE:6187185), complete cds.
ACCESSION BC051800
VERSION BC051800.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5264)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5264)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC051800.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41327727.
FEATURES Location/Qualifiers
source 1..5264
/db_xref="H-InvDB:HIT000053686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57689 IMAGE:6187185"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5264
/gene="CLTC"
/gene_synonym="CHC17"
/gene_synonym="CLH-17"
/gene_synonym="Hc"
/gene_synonym="KIAA0034"
/db_xref="GeneID:1213"
/db_xref="HGNC:HGNC:2092"
/db_xref="MIM:118955"
CDS 213..5132
/gene="CLTC"
/gene_synonym="CHC17"
/gene_synonym="CLH-17"
/gene_synonym="Hc"
/gene_synonym="KIAA0034"
/codon_start=1
/product="CLTC protein"
/protein_id="AAH51800.1"
/db_xref="GeneID:1213"
/db_xref="HGNC:HGNC:2092"
/db_xref="MIM:118955"
/translation="MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKV
GEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAH
TMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA
KQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCF
AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI
TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI
IPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGIL
RTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKV
GYTPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFL
LDALKNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQ
RALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQIC
VQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQ
IKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQK
YIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLK
LLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDP
HLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLID
QVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLIL
TAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEH
IGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANT
SGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDR
CYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD
GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITM
MNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAV
NYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNIS
LAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEE
LLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKV
DKLDASESLRKEEEQATETQPIVYGNLSL"
BASE COUNT 1582 a 1072 c 1164 g 1446 t
ORIGIN
1 cccggttccg ccattgcggc tctcctggcc cctggagcct ccgcccccga cccgagctct
61 ttcgtctgcc tgccagtttc ctgcgtcccc ggagaggatc ctgctgagcc cagcctcccc
121 cctccccttc tcctcctctc ccttggagag cccgggcagc cactgccccg cagccccagt
181 gacaggagga gaccataacc cccgacagcg ccatggccca gattctgcca attcgttttc
241 aggagcatct ccagctccag aacctgggta tcaacccagc aaacattggc ttcagtaccc
301 tgactatgga gtctgacaaa ttcatctgca ttagagaaaa agtaggagag caggcccagg
361 tggtaatcat tgatatgaat gacccaagta atccaattcg aagaccaatt tcagcagaca
421 gcgccatcat gaatccagct agcaaagtaa ttgcactgaa agctgggaaa actcttcaga
481 tttttaacat tgaaatgaaa agtaaaatga aggctcatac catgactgat gatgtcacct
541 tttggaaatg gatctctttg aatacggttg ctcttgttac ggataatgca gtttatcact
601 ggagtatgga aggagagtct cagccagtga aaatgtttga tcgccattct agccttgcag
661 ggtgccagat tatcaattac cgtacagatg caaaacaaaa gtggttactt ctgactggta
721 tatctgcaca gcaaaatcgt gtggtgggag ctatgcagct atattctgta gataggaaag
781 tgtctcagcc cattgaagga catgcagcta gctttgcaca gtttaagatg gaaggaaatg
841 cagaagaatc aacgttattt tgttttgcag ttcggggcca agctggaggg aagttacata
901 ttattgaagt tggcacacca cctacaggga accagccctt tccaaagaag gcagtggatg
961 tcttctttcc tccagaagca caaaatgatt ttcctgttgc aatgcagatc agtgaaaagc
1021 atgatgtggt gttcttgata accaagtatg gttatatcca cctctatgat cttgagactg
1081 gtacctgcat ctacatgaat agaatcagtg gagaaacaat ttttgttact gcacctcatg
1141 aagccacagc tggaataatt ggagtaaaca gaaagggaca agttctgtca gtgtgtgtgg
1201 aagaagaaaa cataattcct tacatcacca atgttctaca aaatcctgat ttggctctga
1261 gaatggctgt acgtaataac ttagccggtg ctgaagaact ctttgcccgg aaatttaatg
1321 ctctttttgc ccagggaaat tactcggagg cagcaaaggt ggctgctaat gcaccaaagg
1381 gaattcttcg tactccagac actatccgtc ggttccagag tgtcccagcc cagccaggtc
1441 aaacttctcc tctacttcag tactttggta tccttttgga ccagggacag ctcaacaaat
1501 acgaatcctt agagctttgt aggcctgtac ttcagcaagg gcgaaaacag cttttggaga
1561 aatggttaaa agaagataag ctggaatgtt ctgaagaact gggtgatctt gtgaaatctg
1621 tggaccctac attggcactt agtgtgtacc taagggctaa cgtcccaaat aaagtcattc
1681 agtgctttgc agaaacaggt caagtccaaa agattgtttt atatgctaaa aaagttggat
1741 acactccaga ttggatattt ctgctgagaa atgtaatgcg aatcagtcca gatcagggac
1801 agcagtttgc ccaaatgtta gttcaagatg aagagcctct tgctgacatc acacagattg
1861 tagatgtctt tatggaatac aatctaattc agcagtgtac tgcattcttg cttgatgctc
1921 tgaagaataa tcgcccatct gaaggtcctt tacagacgcg gttacttgag atgaacctta
1981 tgcatgcgcc tcaagttgca gatgctattc taggcaatca gatgttcaca cattatgacc
2041 gggctcatat tgctcaactg tgtgaaaagg ctggcctact gcagcgtgca ttagaacatt
2101 tcactgattt atatgatata aaacgtgcag tggttcacac ccatcttctt aaccctgagt
2161 ggttagtcaa ctactttggt tccttatcag tagaagactc cctagaatgt ctcagagcca
2221 tgctgtctgc caacatccgt cagaatctgc agatttgtgt tcaggtggct tctaaatatc
2281 atgaacaact gtcaactcag tctctgattg aactttttga atctttcaag agttttgaag
2341 gtctctttta ttttctggga tccattgtta actttagcca ggacccagat gtgcacttta
2401 aatatattca ggcagcttgc aagactgggc aaatcaaaga agtagaaaga atctgtagag
2461 aaagcaactg ctacgatcct gagcgagtca agaattttct taaggaagca aaactaacag
2521 atcagctacc acttatcatt gtgtgtgatc gatttgactt tgtccatgat ttggtgctct
2581 atttatatag aaataatctt caaaagtata tagagatata tgtacagaag gtgaatccaa
2641 gtcgacttcc tgtagttatt ggaggattac ttgatgttga ctgttctgaa gatgtcataa
2701 aaaacttgat tcttgttgta agaggtcaat tctctactga tgagcttgtt gctgaggttg
2761 aaaaaagaaa cagattgaaa ctgcttctgc cttggctaga ggccagaatt catgagggct
2821 gtgaggagcc tgctactcac aatgccttag ccaaaatcta catagacagt aataacaacc
2881 cggagagatt tcttcgtgaa aatccctact atgacagtcg cgttgttgga aagtattgtg
2941 agaagagaga tccacatctg gcctgtgttg cttatgaacg tggccaatgt gatctggaac
3001 ttattaatgt ttgcaatgag aattccctct tcaaaagtct ttctcgctac ctggtacgtc
3061 gaaaggatcc agaattgtgg ggcagcgtgc tgctggaaag caatccttac aggagacccc
3121 taattgacca ggttgtacaa acagctttgt ctgagactca ggaccctgaa gaagtgtcag
3181 taactgtaaa ggctttcatg actgcagacc ttcctaatga actcattgaa ctgctggaga
3241 aaattgtcct tgataactct gtattcagtg aacacaggaa tctgcaaaac ctccttatcc
3301 tcactgcaat taaggctgac cgtacacgtg ttatggagta tattaaccgc ctggataatt
3361 atgatgcccc agatattgcc aatatcgcca tcagcaatga gctgtttgaa gaagcatttg
3421 ccattttccg gaaatttgat gtcaatactt cagcagttca ggtcttaatt gagcatattg
3481 gaaacttgga tcgggcatat gagtttgctg aacgttgcaa tgaacctgcg gtctggagtc
3541 aacttgcaaa agcccagttg cagaaaggaa tggtgaaaga agccattgat tcttatatca
3601 aagcagatga tccttcctcc tacatggaag ttgttcaggc tgccaatact agtggaaact
3661 gggaagaact ggtgaagtac ttgcagatgg cccgtaagaa ggctcgagag tcctatgtgg
3721 agacagaact gatattcgca ctggctaaaa caaaccgcct tgcagagtta gaagaattta
3781 tcaatggacc aaataatgct catatccaac aagttggtga ccgttgttat gatgaaaaaa
3841 tgtatgatgc tgctaagttg ttgtacaata atgtttccaa ttttggacgt ttggcatcta
3901 ccctggttca cctgggtgaa tatcaggcag ctgttgatgg ggctaggaaa gctaacagta
3961 ctcgaacatg gaaagaggtc tgcttcgcct gtgtagatgg gaaagaattc cgtcttgctc
4021 agatgtgtgg acttcatatt gttgtacatg cagatgaatt agaagaactt atcaactact
4081 atcaggatcg tggctatttt gaagagctga tcaccatgtt ggaagcagca ctgggacttg
4141 agcgagctca catgggaatg tttactgaat tagctattct atactctaaa tttaagcctc
4201 agaaaatgag ggagcacctg gagctgttct ggtctagagt gaatattccc aaggtgctaa
4261 gagctgcaga acaagctcat ctttgggcag aactggtgtt tttgtatgac aagtatgaag
4321 aatatgataa tgccataatt accatgatga atcatccaac tgatgcctgg aaagaagggc
4381 aattcaaaga tatcattacc aaggttgcca atgtggaact atactacaga gcaatacagt
4441 tctacttaga attcaagcct ctgttgttaa atgatttgct gatggtgctg tctccacggt
4501 tggatcacac tcgtgcagtc aattatttca gcaaggttaa acagctacca ctggtgaaac
4561 cgtatttgcg ttcagttcag aaccataaca acaaatctgt gaatgaatca ttgaacaatc
4621 tttttattac agaagaagat tatcaggctc tgcgaacatc aatagatgct tatgacaact
4681 ttgacaatat ctcgcttgct cagcgtttgg aaaaacatga actcattgag ttcaggagaa
4741 ttgctgctta tctcttcaaa ggcaacaatc gctggaaaca gagtgtagag ctgtgcaaga
4801 aagacagcct ttacaaggat gcaatgcagt atgcttctga atctaaagat actgaattgg
4861 ctgaagaact cctgcagtgg tttttgcagg aagaaaaaag agagtgcttt ggagcttgtc
4921 tgtttacctg ttacgatctt ttaaggccag atgtcgtcct agaaactgca tggaggcaca
4981 atatcatgga ttttgccatg ccctatttca tccaggtcat gaaggagtac ttgacaaagg
5041 tggataaatt agatgcttca gaatcactga gaaaagaaga agaacaagct acagagacac
5101 aacccattgt ttatggtaat ctctctctgt aacctcaaaa aattcattag acaaatattt
5161 aattacttag agactgtgcc tcaaaataga atacaacaag cttctaaagt gcaaaaggct
5221 ttctaagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//