LOCUS BC051755 3837 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cat eye syndrome chromosome region, candidate 1, mRNA
(cDNA clone MGC:51862 IMAGE:5753141), complete cds.
ACCESSION BC051755
VERSION BC051755.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29029549.
FEATURES Location/Qualifiers
source 1..3837
/db_xref="H-InvDB:HIT000053671"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51862 IMAGE:5753141"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3837
/gene="CECR1"
/db_xref="GeneID:51816"
/db_xref="HGNC:HGNC:1839"
/db_xref="MIM:607575"
CDS 48..1583
/gene="CECR1"
/codon_start=1
/product="cat eye syndrome chromosome region, candidate 1"
/protein_id="AAH51755.1"
/db_xref="GeneID:51816"
/db_xref="HGNC:HGNC:1839"
/db_xref="MIM:607575"
/translation="MLVDGPSERPALCFLLLAVAMSFFGSALSIDETRAHLLLKEKMM
RLGGRLVLNTKEELANERLMTLKIAEMKEAMRTLIFPPSMHFFQAKHLIERSQVFNIL
RMMPKGAALHLHDIGIVTMDWLVRNVTYRPHCHICFTPRGIMQFRFAHPTPRPSEKCS
KWILLEDYRKRVQNVTEFDDSLLRNFTLVTQHPEVIYTNQNVVWSKFETIFFTISGLI
HYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKF
VETHPEFIGIKIIYSDHRSKDVAVIAESIRMAMGLRIKFPTVVAGFDLVGHEDTGHSL
HDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHGFALSKHP
ALRTYSWKKDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKG
LSYDFYEVFMGIGGMKADLRTLKQLAMNSIKYSTLLESEKNTFMEIWKKRWDKFIADV
ATK"
BASE COUNT 885 a 1045 c 848 g 1059 t
ORIGIN
1 gtcccgtgga gtctccatct gagccctttc ctagtccagg catcccgatg ttggtggatg
61 gcccatctga gcggccagcc ctgtgcttct tgctgttggc tgtggcaatg tctttcttcg
121 gctcagctct atccatagat gaaacacggg cgcatctgtt gttgaaagaa aagatgatgc
181 ggctcggggg gcggctggtg ctgaacacca aggaggagct ggccaatgag aggctcatga
241 cgctcaaaat cgctgagatg aaggaggcca tgaggaccct gatattccca cccagcatgc
301 actttttcca ggccaagcat ctcattgaga gaagtcaagt gtttaatatt ctaaggatga
361 tgccaaaagg ggctgccttg cacctccatg acattggcat cgtgactatg gactggctgg
421 tgaggaatgt cacctacagg cctcactgcc acatctgttt caccccaagg gggatcatgc
481 agttcagatt tgctcaccca actccccgtc catcagaaaa atgttccaag tggattctgc
541 tggaggatta tcggaagcgg gtgcagaacg tcactgagtt tgatgacagc ttgctgagga
601 atttcactct ggtgacccag cacccggagg tgatttacac aaaccaaaat gttgtctggt
661 cgaaatttga aaccatcttc ttcaccatct ctggtctcat ccattacgca ccagtgttca
721 gagactatgt cttccggagc atgcaggagt tctacgagga caacgtgctc tacatggaga
781 tcagagccag gctgctgccg gtgtatgagc tcagtggaga gcaccatgac gaagagtggt
841 cagtgaagac ttaccaggaa gtagctcaga agtttgtgga aactcaccct gagtttattg
901 gaatcaaaat catttattcg gatcacagat ccaaagatgt ggctgtcatc gcagaatcca
961 tccgaatggc catggggctc cgaatcaagt tccccacggt ggtggcaggg tttgacctgg
1021 tggggcatga ggacactggc cactccttgc atgactacaa ggaagctctg atgatccccg
1081 ccaaggatgg cgttaagctg ccttacttct tccacgccgg agaaacagac tggcagggta
1141 cttccataga caggaacatt ctggatgctc tgatgctgaa cactaccaga atcggccatg
1201 gatttgcttt gagcaaacac cccgcactca ggacttactc ctggaaaaag gacatcccca
1261 tagaagtctg tcccatctct aaccaggtgc tgaaactggt gtctgacttg aggaaccacc
1321 ctgtagccac tctgatggcc actgggcacc ccatggtgat cagctctgat gacccagcta
1381 tgtttggtgc caaaggcttg tcctacgatt tctatgaggt cttcatgggc attgggggga
1441 tgaaggctga cctgaggacc ctcaaacagc tggccatgaa ctctatcaag tacagtaccc
1501 tgttggagag tgagaaaaat actttcatgg aaatctggaa gaagagatgg gataagttca
1561 tagcagatgt ggctacaaag tgaggagaag ctagccagcc ctctacaagc tgtcttcttg
1621 cacacgctgt cacttcctct cactcgttct tgaatcagct ccatgtgccc atgaaatcaa
1681 tggcctctgt atggagcgac cctgtgagaa gcacttggct ggctgagcaa attcatcctc
1741 tggaaatatt ctctctcagc cacagtgaca ttgaccctct tggttttctc ctctctctgg
1801 ccatttcttc cagtttccct atttcagagt cttctcctct ctctgatctc tgtgctgttt
1861 cctcaggact cagtcctggg ctctcttcta ttctggtctc tttatttttt tatttttgta
1921 ttttttcgag atggagtttt gctcttgttg cccaggctgg agtacaatgg tgcgatctca
1981 gctcagtgca acctccgcca cccgggttca ggcaattctc atgcatcagc ctcccgagta
2041 gttggaatta taggcatgtg ccaccacacc cagctgattt ttgcattttt agtagagaca
2101 ggttttcacc atgttggcga ggctggtatc caactcttga cctcaggtga tccactcgcc
2161 ccttagctcc caaagtgctg gaattacagg cgttagccac catgcctggc ctattctggt
2221 ctctttaact ctctcctctt tatttctctt ctctctctgt acacttttcc tgggtggtct
2281 catccattcc tttgcttttt cataccattt atttgttaat gattcccaca tttatttatg
2341 cacttggaga gctcacagga atctcagaaa ctgatgaggt acaattctga accctcagtc
2401 tcttcccttt aaacctttct ttttctctac tttaattttt ctaaagagtg tcttgctatg
2461 ttgcccaggc tggtctccaa ctcaagtgat cctcctgccg cagtctcccg aagtgctggg
2521 attactgaca tgagccacca cactcagccc tttaaacctt tccctggcct ttcccatagc
2581 tggtgaagga cacctccatc cattccaccc agttgctcaa agcagaaatt ttcagtgcaa
2641 gtcttgatgc tgcgccgtcc cccactccct acatcagaac gcatccctca tctggactcc
2701 agcggtggct tcttgatgct gcgcggtccc ccactcccta catcagaatg catcccgcat
2761 ccagactcca gcggtggcgc tctacctgca cgctgttgcc aagtccaagc taccatactc
2821 ctgcctgagc tatgacaaca gcctcctcac tgatctcccc tttcttccct ttgcctcctc
2881 cagctcattt ttcacagtgt agaatgacat tttgtttgtt tgttttgttt tgtttgagat
2941 ggagtctcgc tctgttgccc agggtggagt gcagcggtgc gatctcggct cactgcaacc
3001 tccacctccc gggttcaagc ggattctcgt gcctcagcct cctgagtagc tgggattacg
3061 ggcatgcacc accatgcccg gataattttt gtatttttag tagagatggg gtttcactat
3121 gttggccagg ctggtctcga acacctgacc tcgtggtcca cccgcctcgg cctcccaaag
3181 cactgggatt acaggcgtga gccacccggc ctggcctaga atgactttta aaagatcaaa
3241 ttaaatcagg tcactccttt gcttacaacg cagtgcgttt agaggtacac cccatgtctc
3301 cacagggcac acagcatccg atttaatctg gatccattcc ggcgccttcc tctcccagtc
3361 acccagaggg ccccaacccc ggcggccctt tcttcctcag atgtcctcgg ctctataccg
3421 tgcctgggtc ttttctcttt ctctctgcct ggaacattcc ttctttcccc ttttgtcttg
3481 cccactcctg tttacccttc aagtttcaag ttcatgtcac tgtctcagag aggttttcct
3541 gtgctcgccc tgtttctctc aggaagcctt gctcttttcc atcatgcctc taatcacagc
3601 ttataatcgg atatttattt ctgtgtctac agtcttgccc tgccagactg taagccccat
3661 gtgggcaggc gctcatgatt gtttctgatt gtttcacgca tgctgctaac ccagagcctg
3721 ggcccaaagc tagttagtac tcaataaaca atgcattgaa tgaaaaaaaa aaaaaaaaaa
3781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//