LOCUS BC051345 1682 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens ubiquitin specific peptidase 8, mRNA (cDNA clone
IMAGE:6429817), partial cds.
ACCESSION BC051345
VERSION BC051345.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: m Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281375.
FEATURES Location/Qualifiers
source 1..1682
/db_xref="H-InvDB:HIT000099323"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6429817"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1682
/gene="USP8"
/gene_synonym="HumORF8"
/gene_synonym="KIAA0055"
/gene_synonym="UBPY"
/db_xref="GeneID:9101"
/db_xref="MIM:603158"
CDS 243..>1682
/gene="USP8"
/gene_synonym="HumORF8"
/gene_synonym="KIAA0055"
/gene_synonym="UBPY"
/codon_start=1
/product="USP8 protein"
/protein_id="AAH51345.1"
/db_xref="GeneID:9101"
/db_xref="MIM:603158"
/translation="MPAVASVPKELYLSSSLKDLNKKTEVKPEKISTKSYVHSALKIF
KTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEA
ERLSESLKLRYEEAEVRKKLEEKDRQEEAQRLQQKRQETGREDGGTLAKGSLENVLDS
KDKTQKSNGEKNEKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS
LSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS
LKDALFKWESKTVLRNEPLVLEGGYENWLLCYPQYTTNAKVTPPPRRQNEEVSISLDF
TYPSLEESIPSKPAAQTPPASIEVDENIELISGQNERMGPLNISTPVEPVAASKSDVS
PIIQPVPSIKNVPQIDRTKKPAVKLPEEHRIKSESTNHEQQSPQSGKVIPDRSTKPVV
FSPTLMLTDEEKARIHAETALLMEKKKKKK"
BASE COUNT 583 a 328 c 376 g 395 t
ORIGIN
1 agaaggctgg cgttagtgaa gcgcgcccgg cgtcacggtg agtgcgggtc ttgggcccta
61 gcacctgttc tctgggaagt cgtccgctgt gaacgatgaa cgcctttcct tccaccagct
121 gctggttacc ccggagacaa gctctgtccg cggagaggag tgggacaact cctaaaggaa
181 agaagcactt gtaaggaaat atagcatcca ttgtgaaagt ggaaaagtaa agataattca
241 tcatgcctgc tgtggcttca gttcctaaag aactctacct cagttcttca ctaaaagacc
301 ttaataagaa gacagaagtt aaaccagaga aaataagcac taagagttat gtgcacagtg
361 ccctgaagat ctttaagaca gcagaagaat gcagattaga tcgtgatgag gaaagggcct
421 atgtactata tatgaaatac gtgactgttt ataatcttat caaaaaaaga cctgatttca
481 agcaacagca ggattatttc cattcaatac ttggacctgg aaacatcaaa aaagctgtcg
541 aagaagctga aagactctct gaaagcctta aattaagata tgaagaagct gaagtccgga
601 aaaaacttga ggaaaaagac aggcaggagg aagcacagcg gctacaacaa aaaaggcagg
661 aaacaggaag agaggatggt ggcacattgg ctaaaggctc tttggagaat gttttggatt
721 ccaaagacaa aacccaaaag agcaatggtg aaaagaatga aaaatgtgag accaaagaga
781 aaggagcaat cacagcaaag gaactataca caatgatgac ggataaaaac atcagcttga
841 ttataatgga tgctcgaaga atgcaggatt atcaggattc ctgtatttta cattctctca
901 gtgttcctga agaagccatc agtccaggag tcactgctag ttggattgaa gcacacctgc
961 cagatgattc taaagacaca tggaagaaga gggggaatgt ggagtatgtg gtacttcttg
1021 actggtttag ttctgccaaa gatttacaga ttggaacaac tctccggagt ctgaaagatg
1081 cacttttcaa gtgggaaagt aaaactgtcc tgcgcaatga gcctttggtt ttagagggag
1141 gctatgaaaa ctggctcctt tgttatcccc agtatacaac aaatgctaag gtcactccac
1201 ccccacgacg ccagaatgaa gaggtgtcta tctcattgga ttttacttat ccctcattgg
1261 aagaatcaat tccttctaaa cctgctgccc agacgccacc tgcatctata gaagtagatg
1321 aaaatataga attgataagt ggtcaaaatg agagaatggg accactgaat atatcaactc
1381 cagttgaacc agttgctgct tctaaatctg atgtttcacc cataattcag ccagtgccta
1441 gtataaagaa tgttccacag attgatcgta ctaaaaaacc agcagtcaaa ttgcctgaag
1501 agcatagaat aaaatctgaa agtacaaacc atgagcaaca atctcctcag agtggaaaag
1561 ttattcctga tcgttccacc aagccagtag ttttttctcc aactctcatg ttaacagatg
1621 aagaaaaggc tcgtattcat gcagaaactg ctcttctaat ggaaaaaaaa aaaaaaaaaa
1681 aa
//