LOCUS BC051322 3345 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 8 family, member A,
mRNA (cDNA clone MGC:59975 IMAGE:6250713), complete cds.
ACCESSION BC051322
VERSION BC051322.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3345)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3345)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: g Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62241039.
FEATURES Location/Qualifiers
source 1..3345
/db_xref="H-InvDB:HIT000053623"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59975 IMAGE:6250713"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3345
/gene="LRRC8A"
/gene_synonym="FLJ10337"
/gene_synonym="KIAA1437"
/db_xref="GeneID:56262"
/db_xref="HGNC:HGNC:19027"
/db_xref="MIM:608360"
CDS 167..2599
/gene="LRRC8A"
/gene_synonym="FLJ10337"
/gene_synonym="KIAA1437"
/codon_start=1
/product="leucine rich repeat containing 8 family, member
A"
/protein_id="AAH51322.1"
/db_xref="GeneID:56262"
/db_xref="HGNC:HGNC:19027"
/db_xref="MIM:608360"
/translation="MIPVTELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGT
LQVTQDKMICLPCKWVTKDSCNDSFRGWAAPGPEPTYPNSTILPTPDTGPTGIKYDLD
RHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSIL
LKCFDSPWTTRALSETVVEESDPKPAFSKMNGSMDKKSSTVSEDVEATVPMLQRTKSR
IEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFI
LIICYTVYYVHNIKFDVDCTVDIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGL
ICMYTLWWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFMLHLIDQYDPLYSKRFAV
FLSEVSENKLRQLNLNNEWTLDKLRQRLTKNAQDKLELHLFMLSGIPDTVFDLVELEV
LKLELIPDVTIPPSIAQLTGLKELWLYHTAAKIEAPALAFLRENLRALHIKFTDIKEI
PLWIYSLKTLEELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVG
VHLQKLSINNEGTKLIVLNSLKKMANLTELELIRCDLERIPHSIFSLHNLQEIDLKDN
NLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLF
YCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAITANRIETLPPELFQCRKLRALHLGN
NVLQSLPSRVGELTNLTQIELRGNRLECLPVELGECPLLKRSGLVVEEDLFNTLPPEV
KERLWRADKEQA"
BASE COUNT 742 a 1034 c 936 g 633 t
ORIGIN
1 gcggccgggg cctggggctg cctgccgggc ggccgggcgc ggcgagccca gggaggcagc
61 gtccatggag caaaaggaat gccaggatcc tgcacaggca gacgcgggcc agcctcagca
121 ccgacagccg acgcgcagat agcagagcca tccttggggt tgaaccatga ttccggtgac
181 agagctccgc tactttgcgg acacgcagcc agcataccgg atcctgaagc cgtggtggga
241 tgtgttcaca gactacatct ctatcgtcat gctgatgatt gccgtcttcg gggggacgct
301 gcaggtcacc caagacaaga tgatctgcct gccttgtaag tgggtcacca aggactcctg
361 caatgattcg ttccggggct gggcagcccc tggcccggag cccacctacc ccaactccac
421 cattctgccg acccctgaca cgggccccac aggcatcaag tatgacctgg accggcacca
481 gtacaactac gtggacgctg tgtgctatga gaaccgactg cactggtttg ccaagtactt
541 cccctacctg gtgcttctgc acacgctcat cttcctggcc tgcagcaact tctggttcaa
601 attcccgcgc accagctcga agctggagca ctttgtgtct atcctgctga agtgcttcga
661 ctcgccctgg accacgaggg ccctgtcgga gacagtggtg gaggagagcg accccaagcc
721 ggccttcagc aagatgaatg ggtccatgga caaaaagtca tcgaccgtca gtgaggacgt
781 ggaggccacc gtgcccatgc tgcagcggac caagtcacgg atcgagcagg gtatcgtgga
841 ccgctcagag acgggcgtgc tggacaagaa ggagggggag caagccaagg cgctgtttga
901 gaaggtgaag aagttccgga cccatgtgga ggagggggac attgtgtacc gcctctacat
961 gcggcagacc atcatcaagg tgatcaagtt catcctcatc atctgctaca ccgtctacta
1021 cgtgcacaac atcaagttcg acgtggactg caccgtggac attgagagcc tgacgggcta
1081 ccgcacctac cgctgtgccc accccctggc cacactcttc aagatcctgg cgtccttcta
1141 catcagccta gtcatcttct acggcctcat ctgcatgtat acactgtggt ggatgctacg
1201 gcgctccctc aagaagtact cgtttgagtc gatccgtgag gagagcagct acagcgacat
1261 ccccgacgtc aagaacgact tcgccttcat gctgcacctc attgaccaat acgacccgct
1321 ctactccaag cgcttcgccg tcttcctgtc ggaggtgagt gagaacaagc tgcggcagct
1381 gaacctcaac aacgagtgga cgctggacaa gctccggcag cggctcacca agaacgcgca
1441 ggacaagctg gagctgcacc tgttcatgct cagtggcatc cctgacactg tgtttgacct
1501 ggtggagctg gaggtcctca agctggagct gatccccgac gtgaccatcc cgcccagcat
1561 tgcccagctc acgggcctca aggagctgtg gctctaccac acagcggcca agattgaagc
1621 gcccgcgctg gccttcctgc gcgagaacct gcgggcgctg cacatcaagt tcaccgacat
1681 caaggagatc ccgctgtgga tctatagcct gaagacactg gaggagctgc acctgacggg
1741 caacctgagc gcggagaaca accgctacat cgtcatcgac gggctgcggg agctcaaacg
1801 cctcaaggtg ctgcggctca agagcaacct aagcaagctg ccacaggtgg tcacagatgt
1861 gggcgtgcac ctgcagaagc tgtccatcaa caatgagggc accaagctca tcgtcctcaa
1921 cagcctcaag aagatggcga acctgactga gctggagctg atccgctgtg acctggagcg
1981 catcccccac tccatcttca gcctccacaa cctgcaggag attgacctca aggacaacaa
2041 cctcaagacc atcgaggaga tcatcagctt ccagcacctg caccgcctca cctgccttaa
2101 gctgtggtac aaccacatcg cctacatccc catccagatc ggcaacctca ccaacctgga
2161 gcgcctctac ctgaaccgca acaagatcga gaagatcccc acccagctct tctactgccg
2221 caagctgcgc tacctggacc tcagccacaa caacctgacc ttcctccctg ccgacatcgg
2281 cctcctgcag aacctccaga acctagccat cacggccaac cggatcgaga cgctccctcc
2341 ggagctcttc cagtgccgga agctgcgggc cctgcacctg ggcaacaacg tgctgcagtc
2401 actgccctcc agggtgggcg agctgaccaa cctgacgcag atcgagctgc ggggcaaccg
2461 gctggagtgc ctgcctgtgg agctgggcga gtgcccactg ctcaagcgca gcggcttggt
2521 ggtggaggag gacctgttca acacactgcc acccgaggtg aaggagcggc tgtggagggc
2581 tgacaaggag caggcctgag cgaggccggc ccagcacagc aagcagcagg accgctgccc
2641 agtcctcagg cccggagggg caggcctagc ttctcccaga actcccggac agccaggaca
2701 gcctcgtggc tgggcaggag cctggggccg cttgtgagtc aggccagagc gagaggacag
2761 tatctgtggg gctggcccct tttctccctc tgagactcac gtcccccagg gcaagtgctt
2821 gtggaggaga gcaagtctca agagcgcagt atttggataa tcagggtctc ctccctggag
2881 gccagctctg ccccaggggc tgagctgcca ccagaggtcc tgggaccctc actttagttc
2941 ttggtattta tttttctcca tctcccacct ccttcatcca gataacttat acattcccaa
3001 gaaagttcag cccagatgga aggtgttcag ggaaaggtgg gctgcctttt ccccttgtcc
3061 ttatttagcg atgccgccgg gcatttaaca cccacctgga cttcagcaga gtggtccggg
3121 gcgaaccagc catgggacgg tcacccagca gtgccgggct gggctctgcg gtgcggtcca
3181 cgggagagca ggcctccagc tggaaaggcc aggcctggag cttgcctctt cagtatttgt
3241 ggcagtttta gttttttgtt tttttttttt taatcaaaaa acaatttttt taaaaaaaaa
3301 gctttgaaaa tggatggttt gggtattaaa aaaaaaaaaa aaaaa
//