LOCUS BC051320 1410 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 10,
mRNA (cDNA clone IMAGE:6249210), partial cds.
ACCESSION BC051320
VERSION BC051320.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1410)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1410)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: g Column: 18.
FEATURES Location/Qualifiers
source 1..1410
/db_xref="H-InvDB:HIT000099310"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6249210"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1410
/gene="ABCA10"
/gene_synonym="EST698739"
/db_xref="GeneID:10349"
CDS <1..1261
/gene="ABCA10"
/gene_synonym="EST698739"
/codon_start=2
/product="ABCA10 protein"
/protein_id="AAH51320.1"
/db_xref="GeneID:10349"
/translation="QSVIFLFVIRCLEMKYGNEIMNKDPVFRISPRSRETHPNPEEPE
EEDEDVQAERVQAANALTAPNLEEEPVITASCLHKEYYETKKSCFSTIKKKIAIRNVS
FCVKKGEVLGLLGHNGAGKSTSIKMITGCTKPTAGVVVLQGSRASVRQQHDNSLKFLG
YCPQENSLWPKLTMKEHLELYAAVKGLGKEDAALSISRLVEALKLQEQLKAPVKTLSE
GIKRKLCFVLSILGNPSVVLLDEPFTGMDPEGQQQMWQILQATVKNKERGTLLTTHYM
SEAEAVCDRMAMMVSGTLRCIGSIQHLKNKFGRDYLLEIKMKEPTQVEALHTEILKLF
PQAAWQERYSSLMAYKLPVEDVHPLSRAFFKLEAMKQTFNLEEYSLSQATLEQVFLEL
CKEQELGNVDDKIDTTVEWKLLPQEDP"
misc_feature 248..898
/gene="ABCA10"
/gene_synonym="EST698739"
/note="ABC_ATPase; Region: ABC (ATP-binding cassette)
transporter nucleotide-binding domain"
/db_xref="CDD:cd00267"
BASE COUNT 474 a 270 c 322 g 344 t
ORIGIN
1 tcagagtgtt attttccttt ttgtcataag gtgtctggaa atgaagtatg gaaatgaaat
61 aatgaataaa gacccagttt tcagaatctc tccacggagt agagaaactc atcccaatcc
121 ggaagagccc gaagaagaag atgaagatgt tcaagctgaa agagtccaag cagcaaatgc
181 actcactgct ccaaacttgg aggaggaacc agtcataact gcaagctgtt tacacaagga
241 atattatgag acaaagaaaa gttgcttttc aacaataaag aagaaaatag ccatcagaaa
301 tgtttccttt tgtgttaaaa aaggtgaagt tttgggatta ctaggacaca atggagctgg
361 taaaagtact tccattaaaa tgataactgg gtgcacaaag ccaactgcag gagtggtggt
421 gttacaaggc agcagagcat cagtaaggca acagcatgac aacagcctca agttcttggg
481 gtactgccct caggagaact cactgtggcc caagcttaca atgaaagagc acttggagtt
541 gtatgcagct gtgaaaggac tgggcaaaga agatgctgct ctcagtattt cacgattggt
601 ggaagctctt aagctccagg aacaacttaa ggctcctgtg aaaactctat cagagggaat
661 aaagagaaag ctgtgctttg tgctgagcat cctggggaac ccatcagtgg tgcttctaga
721 tgagccgttc accgggatgg accccgaggg gcagcagcaa atgtggcaga tacttcaggc
781 taccgttaaa aacaaggaga ggggcaccct cttgaccacc cattacatgt cagaggctga
841 ggctgtgtgt gaccgtatgg ccatgatggt gtcaggaacg ctaaggtgta ttggttccat
901 tcaacatctg aaaaacaagt ttggtagaga ttatttacta gaaataaaaa tgaaagaacc
961 tacccaggtg gaagctctcc acacagagat tttgaagctt ttcccacagg ctgcttggca
1021 ggaaagatat tcctctttaa tggcgtataa gttacctgtg gaggatgtcc accctctatc
1081 tcgggccttt ttcaagttag aggcgatgaa acagaccttc aacctggagg aatacagcct
1141 ctctcaggct accttggagc aggtattctt agaactctgt aaagagcagg agctgggaaa
1201 tgttgatgat aaaattgata caacagttga atggaaactt ctcccacagg aagaccctta
1261 aaatgaagaa cctcctaaca ttcaatttta ggtcctacta cattgttagt ttccataatt
1321 ctacaagaat gtttcctttt acttaagtta acaaaagaaa acatttaata aacattcaat
1381 aatgaaaaaa aaaaaaaaaa aaaaaaaaaa
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