LOCUS BC051318 2142 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens natural killer-tumor recognition sequence, mRNA (cDNA
clone IMAGE:6215894), with apparent retained intron.
ACCESSION BC051318
VERSION BC051318.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: g Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676206
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000099309"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6215894"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 580 a 410 c 526 g 626 t
ORIGIN
1 ctgcagtggc agtgctttct cttctgctca cggggacccg ctcaggctgg aggccagcca
61 gctcttgccg ccacctcggt cgcgatgggg gcgcaggacc ggccgcagtg ccacttcgac
121 atcgagatca accgggagcc gggtgagctg gaaactgggg agcgctgctg gggccgaggc
181 ctgccttggc gaaggggagg ggtctaccct cagcaaccct cccccggcct ttttgggagc
241 gggtaggagg cgcaggcaac tttccgtttt ctcttgagag aaaatcagtg ggagaggaag
301 gtggcctggg cacaccccta actcgcagtc cgggcctctt cctgccaaac cccacacacc
361 ccgctgcatc tccggactga gtcctcgtag ccagcctggc gccaagaaaa ggaggtgcag
421 ttctttgagg actttttctc tcccagtgtc tccgtgaggc agacactccc gatccgattt
481 ccggttatct tgcttggtgc tatgaagttt caactagtag gaaatattgt gtgtttccta
541 atcacgatat atcactaata tgttaatttt gcctctattt ttccttaaga atctttagct
601 agaatttcgt ggttcctggg aaaatggctt agtgaagatc ttttgtgata aaccagagca
661 ttttgtacca gcagaattgc agcatgcatg cacttagcat taatgtttgt ctttagggaa
721 tccagacatt tgttagtgta ttttttttaa atgaaacatt tccttctaaa gcatagttat
781 ttcattctaa gtagcagagc gtgcagggtt tcaaactgtt ttcttagctt tttttgttat
841 ccgtgacaaa agttttaatt ggagacatat atatatgtgt tgtctttgtg caacatcttg
901 ttctgcatat tcttatgaga gcctgctact gttctagggt ctggagatag agcagcgcat
961 aaaacaaagg cctcttcctt ttatagttta tattctattg gggggaagac agacaactag
1021 gaaaaaaata acagtgactt gtagttggga tactatttta ataagttggt cagacaaggc
1081 cattttgaga agatgagatt taagcaggta tcagaaggag atgaagtgag ccgtatttaa
1141 gaagagcatt cgtggtagag ggaaacagca cagccctgag gtgaggagta gtatacagtc
1201 aggcgccaaa tgacatttct atctttaaca atggtcttat atataatacc tttttttggt
1261 aactttttaa tgtttagctg tgtttagata tacaaatact tcattgtgtt aaagttgcct
1321 acggtattca gtggagtaac atcctgtaca ggtttgtagc ctaggagcaa atagactata
1381 tagcttaggt gtgtagtagg ccgtaccatc taggtgtgtt taaatacatt ccatgatgtt
1441 cacacaatga cgaaattgcc taattacaca tttctcagaa tccgtcctgg ttattaaaca
1501 atggaggact gtacttgcat gtttgaggga cagcagggtg cccagtgtgg ctggagtaga
1561 agaggaaaga gaatagtaag aaatggcctg taggactgac tctgaggtag gaagatatta
1621 aagggtttcg agcaaaggga tgagataatc ctggaaattt ggttgccttc tctctctttt
1681 taatgttttt agccttgatt gatctttttt ttttttttta aataagtgtt actagaaagc
1741 cttgatggac cttaatcttt attttgtagt gaatccatgc tttagataac agggttattt
1801 tctattaaga attaaaaata gctcacgcct gtaatcccag cactttggga ggcagacgcg
1861 ggtgtatcat tttgaggtca ggagttcgag accagcctgg cctacatggc gaaaccccat
1921 ctctacaagg aataaaaaga ttagctgggc atggtggctc tcttagtttt tgcctgtagt
1981 cccagctatt tgggaggctg agactgaagg actgcttgag cctgggaagc agaggttgca
2041 gtgagtagag attataccac tgcatgtcag cctgggtgac ggagtgagac cctgtctcaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//