LOCUS BC051288 2604 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens naked cuticle homolog 1 (Drosophila), mRNA (cDNA clone
MGC:59666 IMAGE:6646089), complete cds.
ACCESSION BC051288
VERSION BC051288.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2604)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982882.
FEATURES Location/Qualifiers
source 1..2604
/db_xref="H-InvDB:HIT000053606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59666 IMAGE:6646089"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2604
/gene="NKD1"
/db_xref="GeneID:85407"
/db_xref="HGNC:HGNC:17045"
/db_xref="MIM:607851"
CDS 225..1637
/gene="NKD1"
/codon_start=1
/product="naked cuticle homolog 1 (Drosophila)"
/protein_id="AAH51288.1"
/db_xref="GeneID:85407"
/db_xref="HGNC:HGNC:17045"
/db_xref="MIM:607851"
/translation="MGKLHSKPAAVCKRRESPEGDSFAVSAAWARKGIEEWIGRQRCP
GGVSGPRQLRLAGTIGRSTRELVGDVLRDTLSEEEEDDFRLEVALPPEKTDGLGSGDE
KKMERVSEPCPGSKKQLKFEELQCDVSMEEDSRQEWTFTLYDFDNNGKVTREDITSLL
HTIYEVVDSSVNHSPTSSKMLRVKLTVAPDGSQSKRSVLVNQADLQSARPRAETKPTE
DLRSWEKKQRAPLRFQGDSRLEQSGCYHHCVDENIERRNHYLDLAGIENYTSQFGPGS
PSVAQKSELPPRTSNPTRSRSHEPEAIHIPHRKPQGVDPASFHFLDTPIAKVSELQQR
LRGTQDGSKHFVRSPKAQGKSVGVGHVARGARNKPPLGPAIPAVSPSAHLAASPALLP
SLAPLGHKKHKHRAKESQQGCRGLQAPLASGGPVLGREHLRELPALVVYESQAGQPVQ
RHEHHHHHEHHHHYHHFYQT"
BASE COUNT 583 a 790 c 720 g 511 t
ORIGIN
1 gccaatgggc gcgcggggag gcgcgggccg cggcggcggg ctgggggctc ggcgctcccg
61 ggcgtcagtc gggccgcggc gacggcggca ggagcgcgtc ccggcgccgc ctcgggctcc
121 gctcggctcg ggggctgctt cgggaggagg agagccaagg gaggcgccag gcccgcgggc
181 cgggcgcatg gcttagggac gctcccggcc gccgcagccc cagcatgggg aaacttcact
241 ccaagccggc cgccgtgtgc aagcgcaggg agagcccgga aggtgacagc ttcgccgtga
301 gcgctgcctg ggctcggaag ggcatcgagg agtggatcgg gagacagcgc tgcccgggcg
361 gtgtctcggg accccgacag ctgcggttgg cgggcaccat aggccgaagc acccgggagc
421 tcgtgggcga cgtgttgaga gacacgctca gcgaggaaga ggaggacgac tttcggctgg
481 aagtggccct gcctcctgag aagactgacg ggctgggcag cggagatgag aagaagatgg
541 agagagtgag cgaaccctgc ccaggctcca agaagcagct gaagtttgaa gagctccagt
601 gcgacgtgtc catggaggag gacagccggc aggagtggac cttcaccctg tatgactttg
661 acaacaacgg caaggtcacc cgagaggaca tcaccagctt gctgcacacc atctatgagg
721 tggtggactc ctctgtcaac cactccccaa catccagcaa gatgctgcgg gtaaagctca
781 ccgtggcccc cgatggcagc cagagcaaga ggagcgtcct tgtcaatcag gctgacctgc
841 agagcgcaag gccccgagca gagaccaagc ccactgagga cctgcggagc tgggagaaga
901 agcagcgagc cccgctcagg ttccagggtg acagccgcct ggagcagtct ggctgctacc
961 accattgcgt agatgagaac atcgagagga gaaaccacta cttagatctc gccgggatag
1021 aaaactacac gtcccaattt gggcctggct ccccttccgt ggcccagaag tcagaactgc
1081 ccccccgcac ctccaatccc actcgatctc gctcccatga gccggaagcc atccacatcc
1141 cacaccgaaa gccccaaggc gtggacccgg cctccttcca cttccttgac accccaatcg
1201 ccaaggtctc agagctccag caacggctcc ggggcaccca ggacgggagc aagcactttg
1261 tgaggtcccc caaggcccag ggcaagagtg tgggtgtggg ccacgtggcc agaggggcaa
1321 gaaacaagcc ccctctggga cccgccatcc ctgcggtgtc cccctccgcc cacctggctg
1381 ccagcccggc cctcctcccc tccctagccc ccctcgggca caagaagcac aagcaccgag
1441 ccaaggagag ccagcagggc tgccggggcc tgcaggcacc actggcctca ggtggccctg
1501 tcctggggcg ggagcacctg cgggagctgc ccgccttggt ggtgtatgag agccaggccg
1561 ggcagccggt ccagagacat gagcaccacc accaccatga acatcaccac cattaccacc
1621 acttctacca gacatagagc ccctccccag ggccccaccc tgccatatga aggaccccac
1681 ccccgacacc acaaggcatt attattctat taattattgt tattatgatg attattgtta
1741 ttaataatta ttgttactcc actaatattt agctagccta catgtagaag atctatggaa
1801 acacagaact aaacttttat ttatatgttg tggggactgc ataactagcc caggaaatga
1861 ctctggtttt gagtggcctg taatgggcag aggctccctc ggggctcggg atctgcagca
1921 tctatgtgga tcagcccaca cccttcccag agccagggag cccttagcct caactctgcc
1981 ccaccccagc ctcttccagg agagcaccct tacttggccc ggcttccaga gaccctcgaa
2041 atctccgaga agataaacag ctgctacctc ttagtattat tctgatttta ttttgccctt
2101 aactgattgt tatatgctac aagggatttc agtggactgc agagtgcgaa cgtcttgctg
2161 ttgtgttttt atgtcccaac ctagaaacct tagctgtctt ttctggagtt gtctttcatg
2221 cttttccagt gggatcaagc ccttttcccc aagagtccca tctcttctgc catgcacgac
2281 atgaaaatcc acttctcttc cttctccttc ttctctctct actttacagt gatacacaca
2341 cgtatttaag gactatccct gagaccatcc ctctcatttt ggaaactgct agggagggaa
2401 ccaaccactt aaacaagcgt ggttttccaa gatccaggca attgtgtgct gttggttgtg
2461 gtggaggatg tggcacatat atacgtacct acacggttct ctaacagagc tttctgtatc
2521 tatagataga tgccatctgt ccatttctat gtatctttct ataaatatac actctcaggt
2581 atctttaaaa aaaaaaaaaa aaaa
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