LOCUS BC050743 2485 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens SMAD family member 3, mRNA (cDNA clone MGC:60396
IMAGE:6094328), complete cds.
ACCESSION BC050743
VERSION BC050743.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2485)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2485)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52352808.
FEATURES Location/Qualifiers
source 1..2485
/db_xref="H-InvDB:HIT000053585"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60396 IMAGE:6094328"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2485
/gene="SMAD3"
/gene_synonym="DKFZP586N0721"
/gene_synonym="HSPC193"
/gene_synonym="HsT17436"
/gene_synonym="JV15-2"
/gene_synonym="MGC60396"
/gene_synonym="Smad 3"
/db_xref="GeneID:4088"
/db_xref="HGNC:HGNC:6769"
/db_xref="MIM:603109"
CDS 217..1494
/gene="SMAD3"
/gene_synonym="DKFZP586N0721"
/gene_synonym="HSPC193"
/gene_synonym="HsT17436"
/gene_synonym="JV15-2"
/gene_synonym="MGC60396"
/gene_synonym="Smad 3"
/codon_start=1
/product="SMAD family member 3"
/protein_id="AAH50743.1"
/db_xref="GeneID:4088"
/db_xref="HGNC:HGNC:6769"
/db_xref="MIM:603109"
/translation="MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKK
TGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHE
LRAMELCEFAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYSHSI
PENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSPNPMSPAHNN
LDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSN
VNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKI
PPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTST
PCWIELHLNGPLQWLDKVLTQMGSPSIRCSSVS"
BASE COUNT 568 a 752 c 669 g 496 t
ORIGIN
1 gccgtgggag ccgctccggg cgcagggccg cgcgccgagc cccgcaggct gcagcgccgc
61 ggcccggccc ggcgccccgg caacttcgcc gagagttgag gcgaagtttg ggcgaccgcg
121 gcaggccccg gccgagctcc cctctgcgcc cccggcgtcc cgtcgagccc agccccgccg
181 ggggcgctcc tcgccgcccg cgcgccctcc ccagccatgt cgtccatcct gcctttcact
241 cccccgatcg tgaagcgcct gctgggctgg aagaagggcg agcagaacgg gcaggaggag
301 aaatggtgcg agaaggcggt caagagcctg gtcaagaaac tcaagaagac ggggcagctg
361 gacgagctgg agaaggccat caccacgcag aacgtcaaca ccaagtgcat caccatcccc
421 aggtccctgg atggccggtt gcaggtgtcc catcggaagg ggctccctca tgtcatctac
481 tgccgcctgt ggcgatggcc agacctgcac agccaccacg agctgcgggc catggagctg
541 tgtgagttcg ccttcaatat gaagaaggac gaggtctgcg tgaatcccta ccactaccag
601 agagtagaga caccagttct acctcctgtg ttggtgccac gccacacaga gatcccggcc
661 gagttccccc cactggacga ctacagccat tccatccccg aaaacactaa cttccccgca
721 ggcatcgagc cccagagcaa tattccagag accccacccc ctggctacct gagtgaagat
781 ggagaaacca gtgaccacca gatgaaccac agcatggacg caggttctcc aaacctatcc
841 ccgaatccga tgtccccagc acataataac ttggacctgc agccagttac ctactgcgag
901 ccggccttct ggtgctccat ctcctactac gagctgaacc agcgcgtcgg ggagacattc
961 cacgcctcgc agccatccat gactgtggat ggcttcaccg acccctccaa ttcggagcgc
1021 ttctgcctag ggctgctctc caatgtcaac aggaatgcag cagtggagct gacacggaga
1081 cacatcggaa gaggcgtgcg gctctactac atcggagggg aggtcttcgc agagtgcctc
1141 agtgacagcg ctatttttgt ccagtctccc aactgtaacc agcgctatgg ctggcacccg
1201 gccaccgtct gcaagatccc accaggatgc aacctgaaga tcttcaacaa ccaggagttc
1261 gctgccctcc tggcccagtc ggtcaaccag ggctttgagg ctgtctacca gttgacccga
1321 atgtgcacca tccgcatgag cttcgtcaaa ggctggggag cggagtacag gagacagact
1381 gtgaccagta ccccctgctg gattgagctg cacctgaatg ggcctttgca gtggcttgac
1441 aaggtcctca cccagatggg ctccccaagc atccgctgtt ccagtgtgtc ttagagacat
1501 caagtatggt aggggagggc aggcttgggg aaaatggcca tgcaggaggt ggagaaaatt
1561 ggaactctac tcaacccatt gttgtcaagg aagaagaaat ctttctccct caactgaagg
1621 ggtgcaccca cctgttttct gaaacacacg agcaaaccca gaggtggatg ttatgaacag
1681 ctgtgtctgc caaacacatt taccctttgg ccccactttg aagggcaaga aatggcgtct
1741 gctctggtgg cttaagtgag cagaacaggt agtattacac caccggcccc ctccccccag
1801 actctttttt tgagtgacag ctttctggga tgtcacagtc caaccagaaa cacccctctg
1861 tctaggactg cagtgtggag ttcaccttgg aagggcgttc taggtaggaa gagcccgcag
1921 ggccatgcag acctcatgcc cagctctctg acgcttgtga cagtgcctct tccagtgaac
1981 attcccagcc cagccccgcc ccgccccgcc ccaccactcc agcagacctt gccccttgtg
2041 agctggatag acttgggatg gggagggagg gagttttgtc tgtctccctc ccctctcaga
2101 acatactgat tgggaggtgc gtgttcagca gaacctgcac acaggacagc gggaaaaatc
2161 gatgagcgcc acctctttaa aaactcactt acgtttgtcc tttttcactt tgaaaagttg
2221 gaaggatctg ctgaggccca gtgcatatgc aatgtatagt gtctattatc acattaatct
2281 caaagagatt cgaatgacgg taagtgttct catgaagcag gaggcccttg tcgtgggatg
2341 gcatttggtc tcaggcagca ccacactggg tgcgtctcca gtcatctgta agagcttgct
2401 ccagattctg atgcatacgg ctatattggt ttatgtagtc agttgcattc attaaatcaa
2461 ctttatcata aaaaaaaaaa aaaaa
//