LOCUS BC050636 2451 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens HCLS1 binding protein 3, mRNA (cDNA clone MGC:60121
IMAGE:5193161), complete cds.
ACCESSION BC050636
VERSION BC050636.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68800429.
FEATURES Location/Qualifiers
source 1..2451
/db_xref="H-InvDB:HIT000053530"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60121 IMAGE:5193161"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2451
/gene="HS1BP3"
/gene_synonym="ETM2"
/gene_synonym="FLJ14249"
/gene_synonym="HS1-BP3"
/db_xref="GeneID:64342"
/db_xref="HGNC:HGNC:24979"
/db_xref="MIM:609359"
CDS 22..1200
/gene="HS1BP3"
/gene_synonym="ETM2"
/gene_synonym="FLJ14249"
/gene_synonym="HS1-BP3"
/codon_start=1
/product="HCLS1 binding protein 3"
/protein_id="AAH50636.1"
/db_xref="GeneID:64342"
/db_xref="HGNC:HGNC:24979"
/db_xref="MIM:609359"
/translation="MQSPAVLVTSRRLQNAHTGLDLTVPQHQEVRGKMMSGHVEYQIL
VVTRLAAFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLSSRYAAASLPPLPRKVLFVGE
SDIRERRAVFNEILRCVSKDAELAGSPELLEFLGTRSPGAAGLTSRDSSVLDGTDSQT
GNDEEAFDFFEEQDQVAEEGPPVQSLKGEDAEESLEEEEALDPLGIMRSKKPKKHPKV
AVKAKPSPRLTIFDEEVDPDEGLFGPGRKLSPQDPSEDVSSMDPLKLFDDPDLGGAIP
LGDSLLLPAACESGGPTPSLSHRDASKELFRVEEDLDQILNLGAEPKPKPQLKPKPPV
AAKPVIPRKPAVPPKAGPAEAVAGQQKPQEQIQAMDEMDILQYIQDHDTPAQATPSLF
"
BASE COUNT 573 a 725 c 710 g 443 t
ORIGIN
1 cccggagtcc ccgccgccgt catgcagtcc ccggcggtgc tcgtcacctc caggcgactt
61 cagaatgccc acactggcct cgacctgact gtgccccagc accaggaggt acggggcaag
121 atgatgtctg gacacgtgga gtaccagatc ctggtggtga cccgtctggc tgcgttcaag
181 tcggccaagc acaggcccga ggatgtcgtc cagttcttgg tctccaaaaa gtacagcgag
241 attgaggagt tttaccagaa actgagcagt cgttatgcag cagccagcct ccccccacta
301 cccaggaagg tcctgtttgt tggggagtct gacatccggg agaggagagc cgtgttcaat
361 gagatcctgc gctgtgtctc caaggatgcc gagttggcag gcagcccaga gctgctagag
421 ttcttaggta ccagatcccc aggggctgca gggctcacca gcagagattc ctctgtcctg
481 gatggcacag acagtcagac agggaatgat gaagaggctt tcgacttttt tgaggagcaa
541 gaccaagtgg cagaagaggg tccgcccgtc cagagcctga agggcgagga tgctgaggaa
601 tccttggagg aggaggaagc gctggaccct ctgggcatta tgcgctccaa gaagcccaag
661 aaacatccca aagtggccgt gaaagccaag ccctcgcccc ggctcaccat ctttgacgag
721 gaggtggacc ctgatgaggg gctctttggc ccgggcagga agctgtctcc acaggacccc
781 tcggaggacg tgtcatccat ggaccccctg aagctatttg atgatcctga cctcggcggg
841 gccatccccc tgggtgactc cctcctgctg ccggccgcct gtgagagtgg agggcccaca
901 cccagcctca gccacaggga cgcctccaag gaactgttca gagttgaaga ggacttggac
961 cagattctga acctgggagc tgagcccaaa cccaagcccc agcttaagcc caagccacca
1021 gtggcagcta agccggtgat acccagaaaa ccagctgttc cccccaaagc gggcccggct
1081 gaagctgtgg ctgggcagca gaagccgcag gagcagatcc aagccatgga cgagatggac
1141 atcttgcagt acatccagga ccacgataca ccagcccagg ccacccccag cctcttctga
1201 cccttccatg ctggcccctg gcccagcagg cctgtctgtg gggacatcgg tgtgaaggga
1261 agggactggg ccctgcaggg tcagaacctc cccaccccca ggggaggcca ggcagaagcc
1321 tgggtcacag cacccagaac tgcatggttc cattttctcc ggggctgtgg ggccaaagta
1381 gaagcctgcg ggctgcggga gcggctctca ccctaggagc cagagcccaa tgtgtcttat
1441 tccccgtgga catgaagggg agggagggtg tggggatgcc ttgccaacca gaagcccagc
1501 cccaaggatg aagcaagaca tgtggggccg tagcgaggtg tcacatgggg cagggaagct
1561 tcatgcccac gggttctgcc agccccagca cagacccaaa ctggggctgg gcctctatcc
1621 ctcctctgcc tctgttcgca tagtaagaag gagtgaccgg tatcctcccc ttcccctacc
1681 ctaagctgta gcctgggtga ctgactggcc tgggcctggg gtggggacgt ccccaagcca
1741 aattactcca gggcctctgc tcctcgtggc tgccaggggc ctgcagggtc tgggtgggtc
1801 tcccaggaga ggaatactga gtgggagatc ggctgtctgg agtgttctga tgcaagtctc
1861 tctctcctga gcctcctctt gatgcaagct ctaaagggag aagtcaggcc ctgcctctcc
1921 agggtataga cggccctgct aggccccagt tcttcctcct tccccctttc ccaggaaagg
1981 ccagcccagt ccatggcctt cttgggcctc tgggcacaga gccaatgttc gtcattgcag
2041 ctctcagcaa actgggtcat agctttcccc acagctcagc ctggggcctg ggcagggctc
2101 ccagcctgca ccgcctccca ctgccagtgg ggcatgattc tctcaggctt ctgccccgag
2161 gccttcgtcg tcctcagggt ctggacttgg tcagtggcct ttcaccagtg gagctgcctt
2221 cccagggaga aggagccgtg cgccagggca gggcccgtgc cttagacttc tcctgacccc
2281 cagagcgctg gtacacaggt ctaggcacca cacagtgctt tggaaattct cagtgaatga
2341 tgtttaataa agcaaaaaat gtcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//