LOCUS BC050593 1007 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphatidylethanolamine N-methyltransferase, mRNA
(cDNA clone MGC:60030 IMAGE:6148983), complete cds.
ACCESSION BC050593
VERSION BC050593.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1007)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1007)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538477.
FEATURES Location/Qualifiers
source 1..1007
/db_xref="H-InvDB:HIT000053507"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60030 IMAGE:6148983"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1007
/gene="PEMT"
/gene_synonym="MGC2483"
/gene_synonym="PEAMT"
/gene_synonym="PEMPT"
/gene_synonym="PEMT2"
/gene_synonym="PNMT"
/db_xref="GeneID:10400"
/db_xref="HGNC:HGNC:8830"
/db_xref="MIM:602391"
CDS 55..765
/gene="PEMT"
/gene_synonym="MGC2483"
/gene_synonym="PEAMT"
/gene_synonym="PEMPT"
/gene_synonym="PEMT2"
/gene_synonym="PNMT"
/codon_start=1
/product="phosphatidylethanolamine N-methyltransferase"
/protein_id="AAH50593.1"
/db_xref="GeneID:10400"
/db_xref="HGNC:HGNC:8830"
/db_xref="MIM:602391"
/translation="MKRSGNPGAEVTNSSVAGPDCCGGLGNIDFRQADFCVMTRLLGY
VDPLDPSFVAAVITITFNPLYWNVVARWEHKTRKLSRAFGSPYLACYSLSVTILLLNF
LRSHCFTQAMLSQPRMESLDTPAAYSLGLALLGLGVVLVLSSFFALGFAGTFLGDYFG
ILKEARVTVFPFNILDNPMYWGSTANYLGWAIMHASPTGLLLTVLVALTYIVALLYEE
PFTAEIYRQKASGSHKRS"
BASE COUNT 192 a 332 c 290 g 193 t
ORIGIN
1 gggggcgcgt ggctgcagcg gggcccgcgt ggtgcctcct gaggcggccc ccggatgaag
61 agatctggga acccgggagc cgaggtaacg aacagctcgg tggcagggcc tgactgctgc
121 ggaggcctcg gcaatattga ttttagacag gcagacttct gcgttatgac ccggctgctg
181 ggctacgtgg accccctgga tcccagcttt gtggctgctg tcatcaccat caccttcaat
241 ccgctctact ggaatgtggt tgcacgatgg gaacacaaga cccgcaagct gagcagggcc
301 ttcggatccc cctacctggc ctgctactct ctaagcgtca ccatcctgct cctgaacttc
361 ctgcgctcgc actgcttcac gcaggccatg ctgagccagc ccaggatgga gagcctggac
421 acccccgcgg cctacagcct gggcctcgcg ctcctgggac tgggcgtcgt gctcgtgctc
481 tccagcttct ttgcactggg gttcgctgga actttcctag gtgattactt cgggatcctc
541 aaggaggcga gagtgaccgt gttccccttc aacatcctgg acaaccccat gtactgggga
601 agcacagcca actacctggg ctgggccatc atgcacgcca gccccacggg cctgctcctg
661 acggtgctgg tggccctcac ctacatagtg gctctcctat acgaagagcc cttcaccgct
721 gagatctacc ggcagaaagc ctccgggtcc cacaagagga gctgattgag ctgcaacagc
781 tttgctgaag gcctggccag cctcctggcc tgccccaagt ggcaggccct gcgcagggcg
841 agaatggtgc ctgctgctca gggctcgccc ccggcgtggg ctgccccagt gccttggaac
901 ctgctgcctt ggggaccctg gacgtgccga catatggcca ttgagctcca acccacacat
961 tcccattcac caataaaggc accctgaccc caaaaaaaaa aaaaaaa
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