LOCUS BC050465 1041 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens TBC1 domain family, member 7, mRNA (cDNA clone
MGC:54297 IMAGE:6153876), complete cds.
ACCESSION BC050465
VERSION BC050465.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1041)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1041)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475975.
FEATURES Location/Qualifiers
source 1..1041
/db_xref="H-InvDB:HIT000053469"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54297 IMAGE:6153876"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1041
/gene="TBC1D7"
/gene_synonym="dJ257A7.3"
/db_xref="GeneID:51256"
CDS 79..879
/gene="TBC1D7"
/gene_synonym="dJ257A7.3"
/codon_start=1
/product="TBC1D7 protein"
/protein_id="AAH50465.1"
/db_xref="GeneID:51256"
/translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLGILPPHH
ESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPLEP
DDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQYLNLEDGR
LLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAVEILLT
FKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKHCGTPVHSS"
misc_feature 502..852
/gene="TBC1D7"
/gene_synonym="dJ257A7.3"
/note="COG5210; Region: COG5210, GTPase-activating protein
[General function prediction only]"
/db_xref="CDD:COG5210"
BASE COUNT 275 a 221 c 264 g 281 t
ORIGIN
1 gcggcagcgg cagcggcagc ggcgctgagt tttgtctccc gggccgtctg ggcgcgcgcg
61 ggtgtcccag aatgaaatat gactgaggac tctcagagaa actttcgttc agtatattat
121 gagaaagtgg ggtttcgtgg agttgaagaa aagaaatcat tagaaattct cctaaaagat
181 gaccgtctgg gaatcttgcc tccacaccac gagtcccatg ccaaggtgat gatgtatcgt
241 aaggagcagt acttggatgt ccttcatgcc ctgaaagtcg ttcgctttgt tagtgatgcc
301 acacctcagg ctgaagtcta tctccgcatg tatcagctgg agtctgggaa gttacctcga
361 agtccctctt ttccactgga gccagatgat gaagtgtttc ttgccatagc taaagccatg
421 gaggaaatgg tggaagatag tgtcgactgt tactggatca cccgacgctt tgtgaaccaa
481 ttaaatacca agtaccggga ttccttgccc cagttgccaa aagcgtttga acaatacttg
541 aatctggaag atggcagact gctgactcat ctgaggatgt gttccgcggc gcccaaactt
601 ccttatgatc tctggttcaa gaggtgcttt gcgggatgtt tgcctgaatc cagtttacag
661 agggtttggg ataaagttgt gagtggatcc tgtaagatcc tagtttttgt agctgtcgaa
721 attttattaa cctttaaaat aaaagttatg gcactgaaca gtgcagagaa gataacaaag
781 tttctggaaa atattcccca ggacagctca gacgcgatcg tgagcaaggc cattgacttg
841 tggcacaaac actgtgggac cccggtccat tcaagctgaa cgcacccgct ggttgtggac
901 cgtctgccag gcaccacagt gagcattgtg ttcttggcat gtgatctggg aaactgattg
961 aataatacac ttttcttgct ttggtgctca aagtggtttt tttcccccaa taaaattatt
1021 taattgaaaa aaaaaaaaaa a
//