LOCUS BC050420 3151 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+
dependent) 1, methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase, mRNA (cDNA clone MGC:54112
IMAGE:5788176), complete cds.
ACCESSION BC050420
VERSION BC050420.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3151)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3151)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13699867.
FEATURES Location/Qualifiers
source 1..3151
/db_xref="H-InvDB:HIT000053445"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54112 IMAGE:5788176"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3151
/gene="MTHFD1"
/db_xref="GeneID:4522"
/db_xref="HGNC:HGNC:7432"
/db_xref="MIM:172460"
CDS 79..2886
/gene="MTHFD1"
/codon_start=1
/product="methylenetetrahydrofolate dehydrogenase (NADP+
dependent) 1, methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase"
/protein_id="AAH50420.1"
/db_xref="GeneID:4522"
/db_xref="HGNC:HGNC:7432"
/db_xref="MIM:172460"
/translation="MAPAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVG
NRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLP
LDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETG
VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQ
PEMVKGEWIKPGAIVIDCGINYVPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVG
PMTVAMLMQSTVESAKRFLEKFKPGKWMIQYNNLNLKTPVPSDIDISRSCKPKPIGKL
AREIGLLSEEVELYGETKAKVLLSALERLKHRPDGKYVVVTGITPTPLGEGKSTTTIG
LVQALGAHLYQNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAIT
AANNLVAAAIDARIFHELTQTDKALFNRLVPSVNGVRRFSDIQIRRLKRLGIEKTDPT
TLTDEEINRFARLDIDPETITWQRVLDTNDRFLRKITIGQAPTEKGHTRTAQFDISVA
SEIMAVLALTTSLEDMRERLGKMVVASSKKGEPVSAEDLGVSGALTVLMKDAIKPNLM
QTLEGTPVFVHAGPFANIAHGNSSIIADRIALKLVGPEGFVVTEAGFGADIGMEKFFN
IKCRYSGLCPHVVVLVATVRALKMHGGGPTVTAGLPLPKAYIQENLELVEKGFSNLKK
QIENARMFGIPVVVAVNAFKTDTESELDFISRLSREHGAFDAVKCTHWAEGGKGALAL
AQAVQRAAQAPSSFQLLYDLKLPVEDKIRIIAQKIYGADDIELLPEAQHKAEVYTKQG
FGNLPICMAKTHLSLSHNPEQKGVPTGFILPIRDIRASVGAGFLYPLVGTMSTMPGLP
TRPCFYDIDLDPETEQVNGLF"
BASE COUNT 902 a 714 c 810 g 725 t
ORIGIN
1 gttgtcctgc ttggctgcgg agggagtgga acctcgatat tggtggtgtc catcgtgggc
61 agcggactaa taaaggccat ggcgccagca gaaatcctga acgggaagga gatctccgcg
121 caaataaggg cgagactgaa aaatcaagtc actcagttga aggagcaagt acctggtttc
181 acaccacgcc tggcaatatt acaggttggc aacagagatg attccaatct ttatataaat
241 gtgaagctga aggctgctga agagattggg atcaaagcca ctcacattaa gttaccaaga
301 acaaccacag aatctgaggt gatgaagtac attacatctt tgaatgaaga ctctactgta
361 catgggttct tagtgcagct acctttagat tcagagaatt ccattaacac tgaagaagtg
421 atcaatgcta ttgcacccga gaaggatgtg gatggattga ctagcatcaa tgctgggaga
481 cttgctagag gtgacctcaa tgactgtttc attccttgta cgcctaaggg atgcttggaa
541 ctcatcaaag agacaggggt gccgattgcc ggaaggcatg ctgtggtggt tgggcgcagt
601 aaaatagttg gggccccgat gcatgacttg cttctgtgga acaatgccac agtgaccacc
661 tgccactcca agactgccca tctggatgag gaggtaaata aaggtgacat cctggtggtt
721 gcaactggtc agcctgaaat ggttaaaggg gagtggatca aacctggggc aatagtcatc
781 gactgtggaa tcaattatgt cccagatgat aaaaaaccaa atgggagaaa agttgtgggt
841 gatgtggcat acgacgaggc caaagagagg gcgagcttca tcactcctgt tcctggcggc
901 gtagggccca tgacagttgc aatgctcatg cagagcacag tagagagtgc caagcgtttc
961 ctggagaaat ttaagccagg aaagtggatg attcagtata acaaccttaa cctcaagaca
1021 cctgttccaa gtgacattga tatatcacga tcttgtaaac cgaagcccat tggtaagctg
1081 gctcgagaaa ttggtctgct gtctgaagag gtagaattat atggtgaaac aaaggccaaa
1141 gttctgctgt cagcactaga acgcctgaag caccggcctg atgggaaata cgtggtggtg
1201 actggaataa ctccaacacc cctgggagaa gggaaaagca caactacaat cgggctagtg
1261 caagcccttg gtgcccatct ctaccagaat gtctttgcgt gtgtgcgaca gccttctcag
1321 ggccccacct ttggaataaa aggtggcgct gcaggaggcg gctactccca ggtcattcct
1381 atggaagagt ttaatctcca cctcacaggt gacatccatg ccatcactgc agctaataac
1441 ctcgttgctg cggccattga tgctcggata tttcatgaac tgacccagac agacaaggct
1501 ctctttaatc gtttggtgcc atcagtaaat ggagtgagaa ggttctctga catccaaatc
1561 cgaaggttaa agagactagg cattgaaaag actgacccta ccacactgac agatgaagag
1621 ataaacagat ttgcaagatt ggacattgat ccagaaacca taacttggca aagagtgttg
1681 gataccaatg atagattcct gaggaagatc acgattggac aggctccaac ggagaagggt
1741 cacacacgga cggcccagtt tgatatctct gtggccagtg aaattatggc tgtcctggct
1801 ctcaccactt ctctagaaga catgagagag agactgggca aaatggtggt ggcatccagt
1861 aagaaaggag agcccgtcag tgccgaagat ctgggggtga gtggtgcact gacagtgctt
1921 atgaaggacg caatcaagcc caatctcatg cagacactgg agggcactcc agtgtttgtc
1981 catgctggcc cgtttgccaa catcgcacat ggcaattcct ccatcattgc agaccggatc
2041 gcactcaagc ttgttggccc agaagggttt gtagtgacgg aagcaggatt tggagcagac
2101 attggaatgg aaaagttttt taacatcaaa tgccggtatt ccggcctctg cccccacgtg
2161 gtggtgcttg ttgccactgt cagggctctc aagatgcacg ggggcggccc cacggtcact
2221 gctggactgc ctcttcccaa ggcttacata caggagaacc tggagctggt tgaaaaaggc
2281 ttcagtaact tgaagaaaca aattgaaaat gccagaatgt ttggaattcc agtagtagtg
2341 gccgtgaatg cattcaagac ggatacagag tctgagctgg acttcatcag ccgcctttcc
2401 agagaacatg gggcttttga tgccgtgaag tgcactcact gggcagaagg gggcaagggt
2461 gccttagccc tggctcaggc cgtccagaga gcagcacaag cacccagcag cttccagctc
2521 ctttatgacc tcaagctccc agttgaggat aaaatcagga tcattgcaca gaagatctat
2581 ggagcagatg acattgaatt acttcccgaa gctcaacaca aagctgaagt ctacacgaag
2641 cagggctttg ggaatctccc catctgcatg gctaaaacac acttgtcttt gtctcacaac
2701 ccagagcaaa aaggtgtccc tacaggcttc attctgccca ttcgcgacat ccgcgccagc
2761 gttggggctg gttttctgta ccccttagta ggaacgatga gcacaatgcc tggactcccc
2821 acccggccct gtttttatga tattgatttg gaccctgaaa cagaacaggt gaatggatta
2881 ttctaaacag atcaccatcc atcttcaaga agctactttg aaagtctggc cagtgtctat
2941 tcaggcccac tgggagttag gaagtataag taagccaaga gaagtcagcc cctgcccaga
3001 agatctgaaa ctaatagtag gagtttcccc agaagtcatt ttcagcctta attctcatca
3061 tgtataaatt aacataaatc atgcatgtct gtttacttta gtgacgttcc acagaataaa
3121 aggaaacaag tttgcaaaaa aaaaaaaaaa a
//