LOCUS BC050358 2489 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens Tax1 (human T-cell leukemia virus type I) binding
protein 1, mRNA (cDNA clone MGC:51743 IMAGE:6055189), complete cds.
ACCESSION BC050358
VERSION BC050358.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC050358.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: j Column: 6.
FEATURES Location/Qualifiers
source 1..2489
/db_xref="H-InvDB:HIT000053420"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51743 IMAGE:6055189"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2489
/gene="TAX1BP1"
/gene_synonym="CALCOCO3"
/gene_synonym="T6BP"
/gene_synonym="TXBP151"
/db_xref="GeneID:8887"
/db_xref="HGNC:HGNC:11575"
/db_xref="MIM:605326"
CDS 68..2437
/gene="TAX1BP1"
/gene_synonym="CALCOCO3"
/gene_synonym="T6BP"
/gene_synonym="TXBP151"
/codon_start=1
/product="Tax1 (human T-cell leukemia virus type I)
binding protein 1"
/protein_id="AAH50358.1"
/db_xref="GeneID:8887"
/db_xref="HGNC:HGNC:11575"
/db_xref="MIM:605326"
/translation="MTSFQEVPLQTSNFAHVIFQNVAKSYLPNAHLECHYTLTPYIHP
HPKDWVGIFKVGWSTARDYYTFLWSPMPEHYVEGSTVNCVLAFQGYYLPNDDGEFYQF
CYVTHKGEIRGASTPFQFRASSPVEELLTMEDEGNSDMLVVTTKAGLLELKIEKTMKE
KEELLKLIAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVTQSLKMENE
EFKKRFSDATSKAHQLEEDIVSVTHKAIEKETELDSLKDKLKKAQHEREQLECQLKTE
KDEKELYKVHLKNTEIENTKLMSEVQTLKNIDGNKESVITHFKEEIGRLQLCLAEKEN
LQRTFLLTTSSKEDTCFLKEQLRKAEEQVQATRQEVVFLAKELSDAVNVRDRTMADLH
TARLENEKVKKQLADAVAELKLNAMKKDQDKTDTLEHELRREVEDLKLRLQMAADHYK
EKFKECQRLQKQINKLSDQSANNNNVFTKKTGNQQKVNDASVNTDPATSASTVDVKPS
PSAAEADFDIVTKGQVCEMTKEIADKTEKYNKCKQLLQDEKAKCNKYADELAKMELKW
KEQVKIAENVKLELAEVQDNYKELKRSLENPAERKMEGQNSQSPQCFKTCSEQNGYVL
TLSNAQPVLQYGNPYASQETRDGADGAFYPDEIQRPPVRVPSWGLEDNVVCSQPARNF
SRPDGLEDSEDSKEDENVPTAPDPPSQHLRGHGTGFCFDSSFDVHKKCPLCELMFPPN
YDQSKFEEHVESHWKVCPMCSEQFPPDYDQQVFERHVQTHFDQNVLNFD"
BASE COUNT 897 a 450 c 537 g 605 t
ORIGIN
1 gcggatcagg atcggaagcc tgcgtaactt tctcccttga tccgggagtc tttccactgg
61 attcacaatg acatcctttc aagaagtccc attgcagact tccaactttg cccatgtcat
121 ctttcaaaat gtggccaaga gttaccttcc taatgcacac ctggaatgtc attacacctt
181 aactccatat attcatccac atccaaaaga ttgggttggt atattcaagg ttggatggag
241 tactgctcgt gattattaca cgtttttatg gtcccctatg cctgaacatt atgtggaagg
301 atcaacagtc aattgtgtac tagcattcca aggatattac cttccaaatg atgatggaga
361 attttatcag ttctgttacg ttacccataa gggtgaaatt cgtggagcaa gtacaccttt
421 ccagtttcga gcttcttctc cagttgaaga gctgcttact atggaagatg aaggaaattc
481 tgacatgtta gtggtgacca caaaagcagg ccttcttgag ttgaaaattg agaaaaccat
541 gaaagaaaaa gaagaactgt taaagttaat tgccgttctg gaaaaagaaa cagcacaact
601 tcgagaacaa gttgggagaa tggaaagaga acttaaccat gagaaagaaa gatgtgacca
661 actgcaagca gaacaaaagg gtcttactga agtaacacaa agcttaaaaa tggaaaatga
721 agagtttaag aagaggttca gtgatgctac atccaaagcc catcagcttg aggaagatat
781 tgtgtcagta acacataaag caattgaaaa agaaaccgaa ttagacagtt taaaggacaa
841 actcaagaag gcacaacatg aaagagaaca acttgaatgt cagttgaaga cagagaagga
901 tgaaaaggaa ctttataagg tacatttgaa gaatacagaa atagaaaata ccaagcttat
961 gtcagaggtc cagactttaa aaaatataga tgggaacaaa gaaagcgtga ttactcattt
1021 caaagaagag attggcaggc tgcagttatg tttggctgaa aaggaaaatc tgcaaagaac
1081 tttcctgctt acaacctcaa gtaaagaaga tacttgtttt ttaaaggagc aacttcgtaa
1141 agcagaggaa caggttcagg caactcggca agaagttgtc tttctggcta aagaactcag
1201 tgatgctgtc aacgtacgag acagaacgat ggcagacctg catactgcac gcttggaaaa
1261 cgagaaagtg aaaaagcagt tagctgatgc agtggcagaa cttaaactaa atgctatgaa
1321 aaaagatcag gacaagactg atacactgga acacgaacta agaagagaag ttgaagatct
1381 gaaactccgt cttcagatgg ctgcagacca ttataaagaa aaatttaagg aatgccaaag
1441 gctccaaaaa caaataaaca aactttcaga tcaatcagct aataataata atgtcttcac
1501 aaagaaaacg gggaatcagc agaaagtgaa tgatgcttca gtaaacacag acccagccac
1561 ttctgcctct actgtagatg taaagccatc accttctgca gcagaggcag attttgacat
1621 agtaacaaag gggcaagtct gtgaaatgac caaagaaatt gctgacaaaa cagaaaagta
1681 taataaatgt aaacaactct tgcaggatga gaaagcaaaa tgcaataaat atgctgatga
1741 acttgcaaaa atggagctga aatggaaaga acaagtgaaa attgctgaaa atgtaaaact
1801 tgaactagct gaagtacagg acaattataa agaacttaaa aggagtctag aaaatccagc
1861 agaaaggaaa atggaaggtc agaattccca gagtcctcaa tgtttcaaaa catgctcaga
1921 gcaaaatggt tatgttctca cattgtcaaa tgcacaacca gttctgcaat atggtaatcc
1981 ttatgcatct caggaaacaa gagatggagc agatggtgct ttttacccag atgaaataca
2041 aaggccacct gtcagagtcc cctcttgggg actggaagac aatgttgtct gcagccagcc
2101 tgctcgaaac tttagtcggc ctgatggctt agaggactct gaggatagca aagaagatga
2161 gaatgtgcct actgctcctg atcctccaag tcaacattta cgtgggcatg ggacaggctt
2221 ttgctttgat tccagctttg atgttcacaa gaagtgtccc ctctgtgagt taatgtttcc
2281 tcctaactat gatcagagca aatttgaaga acatgttgaa agtcactgga aggtgtgccc
2341 gatgtgcagc gagcagttcc ctcctgacta tgaccagcag gtgtttgaaa ggcatgtgca
2401 gacccatttt gatcagaatg ttctaaattt tgactagtta ctttttatta tgagttaata
2461 tagtttagca gtaaaaaaaa aaaaaaaaa
//