LOCUS BC050291 3037 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens glucocorticoid induced transcript 1, mRNA (cDNA clone
MGC:43752 IMAGE:5272003), complete cds.
ACCESSION BC050291
VERSION BC050291.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3037)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3037)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55742677.
FEATURES Location/Qualifiers
source 1..3037
/db_xref="H-InvDB:HIT000053404"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43752 IMAGE:5272003"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3037
/gene="GLCCI1"
/gene_synonym="FAM117C"
/gene_synonym="GIG18"
/db_xref="GeneID:113263"
/db_xref="HGNC:HGNC:18713"
CDS 560..2203
/gene="GLCCI1"
/gene_synonym="FAM117C"
/gene_synonym="GIG18"
/codon_start=1
/product="glucocorticoid induced transcript 1"
/protein_id="AAH50291.1"
/db_xref="GeneID:113263"
/db_xref="HGNC:HGNC:18713"
/translation="MSTASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVAAAGSGNGAG
GGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAASLGSLPGPGAAR
GPSPSSPTPPAAAAPAEQAPRAKGRPRRSPESHRRSSSPERRSPGSPVCRADKAKSQQ
VRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSH
QRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQATGSR
SVPMPLSNISVPKSSVSRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPL
PAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDK
DSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNK
VNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSD
DTSTAGSMEASVQQPSQQQQLLQELQGEDHISAQNYVII"
BASE COUNT 721 a 891 c 769 g 656 t
ORIGIN
1 agttagttgc cattcggagt gaggagtggg tagaagcggc ggcggcggcg gcggcgtttg
61 cggtggcgcg gactccgagg agcgccagca cctcgaggcc ctttctctct accctggtcc
121 ccagaagcag gggtcccggc cctccttgca gctgccgggt tctcccgtgc gtgcagccct
181 gcgagggctg aggagaaggc tgcgagcggc cctcggggct gcgtgatccg ggccgttgcc
241 ctgtcagcac gatgcctgga gcggtggcgg cggcggctcc gggctccttg cggccccggc
301 cgtgaccgcc acaccgagcc cagccgggcg gttgcggccg ttggacgttt gttttcgcag
361 ccttcccctc ccccctcgcc gaggcggcgg gggtgtgcgt tggggagggg gagccccgag
421 actcctcccc cacagcgata cccccgcccc tcccccttac acactcgcac gcactatcgc
481 gccggctccc acacgctcgc gcgcctcccg ccccgcgcct ccgtgtcggc cggcggcgtc
541 cagggcccgc agagccacca tgtccactgc ctcctcctcc tcctcctcca gttcctctca
601 gacccctcat cccccgtcgc agaggatgag gcgcagcgcc gcggggtccc cgcccgccgt
661 cgccgccgcc gggagcggga acggtgcggg cggcggcggc ggcgtgggct gcgccccggc
721 tgcgggagcc ggccggctgc tgcagcccat ccgcgccacg gtgccctacc agctcttgcg
781 gggcagccag cacagtccca cgcgtccgcc cgtcgccgct gccgccgcct cgctgggcag
841 cctcccgggg cccggcgcgg cccgcggccc cagcccgtcc agcccgacgc cgccggcggc
901 cgcagccccg gccgagcagg cgccgcgggc caagggccgc ccgagacggt ccccagagag
961 ccaccggagg agcagctcac ctgagagacg gagccccggc tcgcccgtgt gcagagcgga
1021 caaggcaaaa tctcagcaag ttcggacctc tagtacaata aggcgaacct cctctttgga
1081 tacaataaca ggaccttacc tcacaggaca gtggccacgg gatcctcatg ttcactaccc
1141 ttcatgcatg aaagacaaag ctactcagac acctagctgt tgggcagaag agggtgcaga
1201 aaagaggtca catcagcgtt ctgcgtcatg ggggagtgct gatcaactaa aagagcagat
1261 cgccaaactg aggcagcaac tacaacgcag taaacagagt agtcgtcaca gtaaggagaa
1321 agatcgccag tcacctcttc atggcaacca tataacaatc agtcacactc aggctactgg
1381 atcaaggtca gttcctatgc cactgtcaaa tatatcagtg ccaaaatcat ctgtttcgcg
1441 tgtgccctgc aatgtagaag gaataagtcc tgaattagaa aaggtattca ttaaagaaaa
1501 taatgggaag gaagaagtat ccaagccgtt ggacatacca gatggtcgaa gagctccact
1561 tcctgctcat taccggagca gtagtactcg cagcattgac actcagactc cttctgtcca
1621 ggagcgcagc agtagctgca gcagtcattc accctgtgtc tccccttttt gtcccccgga
1681 atcccaggat ggtagccctt gctcaacaga agatttgctc tatgatcgtg ataaagacag
1741 tgggagtagc tcaccgttac ccaagtatgc ttcatctccc aaaccaaaca acagctacat
1801 gttcaaacgg gagcccccag agggatgtga gcgagtgaag gtctttgagg aaatggcgtc
1861 tcgtcagcct atctcggccc ctctcttttc atgtcctgac aaaaacaagg ttaatttcat
1921 cccaaccgga tcagctttct gtcctgtaaa acttctaggc cccctcttac ctgcttctga
1981 ccttatgctc aagaactctc ctaactctgg ccagagctca gctttggcaa ctctgaccgt
2041 tgagcagctc tcatcccggg tttcctttac gtctctttct gatgacacca gcacagcggg
2101 ctccatggag gcctctgtcc agcagccatc ccagcagcag cagctcctgc aggaactgca
2161 gggtgaggac cacatctctg ctcagaacta tgtgatcatc taaaaagggg gagctggcct
2221 ccaccctgtg ttccatggat tcggaacaag atttcagaca tctgcatgag tgacaaactt
2281 tctgaacacc accaccacca ataatactta tcagcatcat aaagtatctc ttaaacactg
2341 atcttggcag ggacggaact cctattcagc agtttttgtg gaaagcagta atgcttgcaa
2401 aacgtgtgtg tcattcagca ttttaagtgg agactatgca tttcatagta tatttgacag
2461 attagtactg tgtcctgtgt tttgttccag attcttcagt ataaataagc tctatatcaa
2521 aaagttgcct gtctaaatag aaaatgtctt gctgtgtttt gtcctatgga aaatactgta
2581 attcaggatt atgtttacaa ttgatccagg tgtttgtttc taacttctgt aatacataca
2641 atgcaaaaaa aaaaaaaaaa aatggccaca acagttgcac agtgcccacc ctatggccta
2701 gcttcaggta cttcagttga agtctaaact caggtaactt ggaatgtata tcatattggg
2761 atattaaata tttcacagct aaaaagctaa agagggaaca tcactctttt gcctttcctt
2821 attttatgca tttccctttc ctcattacat tccacattct tagaataaga agtgcattca
2881 atcctaggag aatgataatc ctggacatgg gtgaacatga ggagaaccag caaaatctgt
2941 ggtgtttgac atcactttgt catgtggtta caagtaaaac aactgttgca ttcactgttt
3001 caaaaaaaaa aaaaaaaaaa gaaaaaaaaa aaaaaaa
//