LOCUS BC049372 4061 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens junctophilin 1, mRNA (cDNA clone IMAGE:4830621),
partial cds.
ACCESSION BC049372
VERSION BC049372.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4061)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4061)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: f Column: 10.
FEATURES Location/Qualifiers
source 1..4061
/db_xref="H-InvDB:HIT000099075"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4830621"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4061
/gene="JPH1"
/gene_synonym="JP-1"
/gene_synonym="JP1"
/db_xref="GeneID:56704"
/db_xref="MIM:605266"
CDS <1..1671
/gene="JPH1"
/gene_synonym="JP-1"
/gene_synonym="JP1"
/codon_start=1
/product="JPH1 protein"
/protein_id="AAH49372.1"
/db_xref="GeneID:56704"
/db_xref="MIM:605266"
/translation="LEGTWSNGLQDGYGVETYGDGGTHQGQWAGGMRHGYGVRQSVPY
GMATVIRSPLRTSLASLRSEQSNGSVLHDAAAAADSPAGTRGGFVLNFHADAELAGKK
KGGLFRRGSLLGSMKLRKSESKSSISSKRSSVRSDAAMSRISSSDANSTISFGDVDCD
FCPVEDHVDATTTETYMGEWKNDKRNGFGVSERSNGMKYEGEWANNKRHGYGCTVFPD
GSKEEGKYKNNILVRGIRKQLIPIRHTKTREKVDRAIEGAQRAAAMARTKVEIANSRT
AHARAKADAADQAALAARQECDIARAVARELSPDFYQPGPDYVKQRFQEGVDAKENPE
EKVPEKPPTPKESPHFYRKGTTPPRSPEASPKHSHSPASSPKPLKKQNPSSGARLNQD
KRSVADEQVTAIVNKPLMSKAPTKEAGAVVPQSKYSGRHHIPNPSNGELHSQYHGYYV
KLNAPQHPPVDVEDGDGSSQSSSALVHKPSANKWSPSKSVTKPVAKESKAEPKAKKSE
LAIPKNPASNDSCPALEKEANSGPNSIMIVLVMLLNIGLAILFVHFLT"
BASE COUNT 1185 a 880 c 898 g 1098 t
ORIGIN
1 ctcgagggta cctggagtaa cgggctgcaa gacgggtacg gcgtggagac ctacggggac
61 ggaggtaccc accagggcca gtgggccgga ggcatgcggc atggctacgg cgtgcgccag
121 agcgtgccct acggcatggc cacggtgatc cgctcaccgc tgcgtacctc gctggcctcg
181 ctgcgcagcg agcagagcaa tggcagcgtg ctccacgacg ccgcagccgc cgccgacagc
241 ccggccggca cccgcggcgg tttcgtgctc aacttccacg cagacgctga gctagcgggc
301 aagaagaagg gcggcctctt ccggaggggc tcccttcttg gaagcatgaa acttcgcaag
361 tccgaatcca agtcttccat ctcgagcaag cgcagctctg tccgcagcga cgcggccatg
421 agcagaatta gttccagcga tgccaactcc acgatcagct ttggcgatgt agattgtgat
481 ttttgcccgg tggaagacca cgtggacgcc accaccacgg aaacctacat gggcgagtgg
541 aagaacgaca agcgcaacgg cttcggcgtt agcgagcgct ccaatggcat gaagtatgaa
601 ggggagtggg caaataacaa gaggcatgga tatggctgta ccgtgtttcc tgacggctcc
661 aaagaagagg gaaaatacaa aaataatatt ctggtccgtg ggataaggaa gcagcttata
721 ccaataagac atacaaaaac tagggagaag gtggacagag caattgaagg cgcccaaagg
781 gcagctgcca tggccagaac caaagtggaa atagcaaatt caaggactgc acatgccaga
841 gcgaaggccg atgccgccga ccaggccgcg ctggccgctc gccaggagtg cgacatcgcg
901 agagctgtgg ccagggagct gtcacctgat ttctaccaac caggccctga ttacgtcaaa
961 cagagatttc aggaaggtgt agatgctaaa gaaaatccag aagaaaaggt accagaaaag
1021 ccacctacac caaaggagtc tcctcatttt tatcgcaaag gcacgacacc cccaagatct
1081 cctgaggcaa gtcccaaaca cagccactct cctgcttcct ccccaaagcc cctgaagaag
1141 caaaacccca gctcaggggc gagactcaac caagacaaaa ggagtgtggc tgatgagcag
1201 gtgacggcca ttgtcaataa gcccttgatg tcaaaggctc ccacgaagga ggcaggagcg
1261 gttgtgcctc agtccaagta ctctggccgc caccacatcc ccaaccccag taacggggag
1321 ctgcattctc agtatcacgg ctactacgtg aagctgaacg ccccccagca ccctccagta
1381 gacgtggagg acggcgatgg atccagccag tcttcctcag cactggtgca caagccatcc
1441 gctaacaagt ggagtccctc caaatctgtg acaaaaccag ttgccaaaga aagcaaagct
1501 gagccaaaag ctaagaagtc tgaacttgct ataccaaaga atccagcaag caacgattca
1561 tgccctgctt tggaaaaaga agccaattca ggccctaatt caatcatgat tgtccttgtc
1621 atgctgttga atatcgggtt ggccattctt tttgttcact ttctaacttg attggaatta
1681 ggaaagtgaa gtcctgacaa ctagtggtgt gttagcccac agttctctgc agtggtgccg
1741 tcagcccttt aaatggccca ccccaggcag actcagacac agggaaggag gcttggaatt
1801 aggatgggat cgcgagagag atgaaacttg gaaaattcag ccagaggacc tgttcggttc
1861 ccctgggagt gctttgtggc tttggggtcc tctgggagct gaagcacacg gccatgttgg
1921 agagcaaaac ttaataataa ttctttttta aaatctgctg aagcagcccc atccggcgaa
1981 gttcttggca ttggctactc catctgtcct agcagagtgt gactaaactg gaaatgtatg
2041 gagctgcatt tttttttttt tttgatggaa gtcaacagct gccttactat tttaccatct
2101 gacgttttta gtagggagct ggggaaacga ctgcccgagg aatgcggtcg gaggattgtg
2161 ttgctgtgga cgtggttcca acattcactc ctatctcatt agaagaaata ggtagcagca
2221 tcactcacca gtcttatgcc atgacctgct gctttaacat ctcctggaat gttctgggag
2281 agaacgtttc gtttgcttgt gcacgactct attcattttt gctgtttatt taaatctgat
2341 gtatagtcat ctaccacctg cggtcctggc cggacgaaac acacgtgttg catctcaagg
2401 aaaagaaaca acaaaatgct agtgaaaatg tgcttatttt gatagcaata taccatcttt
2461 tatgtcattt attcttccta tacttgtaaa aggttattta tctttaaaat ttagcaattt
2521 gaagacacta tgccttccta agaactaatt taattctaaa tatttttaac attactgagg
2581 tgaattattt atgcacttag gaagtgctaa attttaaaag ctgaaacaca acagaattct
2641 aagaaatata gtccaaacgt tgcatggatt gcagtaatca gtgtttaaag gattcagttt
2701 ctttgctgac gtactttaca accaaataaa atcttgtcgg tggctgtgtt aattcccatg
2761 aaagttaagc aagatgctat taataaactg ctctgctctt tcttgttttc tttttccaac
2821 ttaaatttct gttgaataca ttcaggtaga acataaagcc ttgttcaatc actgcctctc
2881 agttttctgc ctttcctgtt tttcaaagtc cttttgtaat ttcatttcac attttaaagg
2941 cttagacatt tttattttaa atatgtgtct tttacagtct tttgtcattc tgacatttct
3001 ggatttttgc tgttttataa tttacccttt gttattcaga agcatgctta cttatagaaa
3061 ctaaatggtc tttataaaag taattactta aaaagaaatc aggggaagaa agatatctat
3121 ctaatctatt aaatctttat aaaacattac attgcagagg gggagctact cctaaatatt
3181 ttcatgattt gcatggttta atcagatttt tttttttttt tacaccatat tagctacctt
3241 ttcaatggag aagagacagt tcacacaatt ccctggttag cacagatgtg gactgagtgc
3301 tttgtcacct gcagggtagt aacccagtga tgtttcttac agaagcacaa tatgttgaaa
3361 atcctgggtg tgaccaatat ggaataaaga agaaggcaga aagagagcaa atgaaaaatt
3421 tcaacttgta tattcatttt ttacattttg ctttgacttt taaatttagg aagtccgttt
3481 ttacctgaga acaaatgttt aaagttcctg cgtcactctc agtactctca ctgcccctcc
3541 caaaccctat agctccttac gctgggaaag ctggtttttt taaaaaaata ataataaaat
3601 atttaatctt attaagtgtt catttaaaat gcgtaatgct ttggaaataa tgggtaacag
3661 atagcgagag gatatgttta taaagtgagc atgttggtcc catttataaa tatatgtatg
3721 atttataagc ttttttaaaa caaagctcaa attgttggta tttttctaaa atgtgcacag
3781 ctgtatttta catgaaggct ctttctaatg ggttgttata ctgtactcaa cattttggac
3841 agcacatgaa gtctgccaat gtacttaata aaacatgact ttgtttattt aaagtttctt
3901 gctgtgaaaa agaactccct acctgtgagt tcctttattt ataattcttg aaaccaaaat
3961 gtataatgta cagttttcac aactgtatct gctctaataa aaaaaagttg gttattaaaa
4021 aaaaaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa a
//