LOCUS BC049216 2373 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens AHNAK nucleoprotein 2, mRNA (cDNA clone
IMAGE:5502765), complete cds.
ACCESSION BC049216
VERSION BC049216.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2373)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2373
/db_xref="H-InvDB:HIT000053366"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5502765"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2373
/gene="AHNAK2"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
CDS 99..1550
/gene="AHNAK2"
/codon_start=1
/product="AHNAK2 protein"
/protein_id="AAH49216.1"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
/translation="MRLPETQVLPGEIDETPLSKPGHDLASMEDKTEKWSSQPEGPLK
LKASSTDMPSQISVVNVDQLWEDSVLTVKFPKLMVPRFSFAAPSSEDDVFIPTVREVQ
CPEANIDTALCKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVRVHIQGAQV
ESQEVTIHSIVTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHT
QARVYTTMTQHSRTQEGTEEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQT
LTFEVPSGHQLADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLW
FWLPNIGFSSSVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGWFRFPKLGF
SSSPTKKSKSTEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPVGTGLDSRV
MVTSAARTELILPEQDRKADDESKGSGLGPNEG"
BASE COUNT 673 a 594 c 567 g 539 t
ORIGIN
1 tgcacctttc cactgctggg atgactgggg atgagctttc cacttctgag gtcaggatcc
61 atccatccaa aggacctctc ccttttcaga tgcctggcat gaggcttcca gaaacccagg
121 ttcttccagg agaaatagat gagactcctc tttccaagcc aggacatgac cttgccagca
181 tggaggataa aacagagaaa tggtcttccc agcctgaagg tccacttaaa ttgaaagctt
241 caagtactga tatgccatcc cagatttctg tggttaatgt ggatcaactg tgggaagatt
301 ctgtcctaac tgtcaaattc cccaaattaa tggtaccaag gttctccttc gctgccccca
361 gctcagagga tgatgtgttc atccccactg tgagggaagt gcagtgtcca gaggccaata
421 ttgatacagc cctttgtaag gaaagtccgg ggctctgggg agccagcatc ctgaaggcag
481 gtgctggggt ccctggggag cagcctgtgg accttaacct gcctttggaa gctcccccaa
541 tttcaaaggt cagagtgcat attcagggtg ctcaggttga aagtcaagag gtcactatac
601 acagcatagt gacaccagag tttgtagatc tctcagtacc caggactttt tccactcaga
661 ttgtgcggga atcagagatc cccacgtcag agattcaaac accttcgtac ggattttcct
721 tattaaaagt gaaaatccca gagccccaca cgcaggctag agtgtacaca acaatgactc
781 aacactctag gactcaggag ggcacagaag aggctcccat acaagccacc ccaggagtag
841 actccatttc tggagatctc cagcctgaca ctggagaacc atttgagatg atctcttcca
901 gcgtcaatgt actgggacag caaacactca catttgaagt tccttctggc caccagcttg
961 cagacagctg ttcagatgag gagccagcag aaattcttga gtttccccct gatgatagcc
1021 aagaggcaac cacaccactg gcagatgaag gcagggctcc aaaagacaaa ccagaaagta
1081 aaaaatctgg tctgctctgg ttttggcttc caaacattgg gttttcctct tctgttgatg
1141 agacaggtgt tgattccaaa aatgacgtcc agagatctgc tcccattcaa acacagcctg
1201 aggcacgacc agaggcagaa ctgcctaaaa aacaggagaa ggcaggctgg ttccgatttc
1261 ccaaattagg gttctcctca tctcctacca agaaaagcaa aagcaccgaa gatggggcag
1321 agctggaaga acaaaaactt caagaagaaa caatcacgtt ttttgatgcc cgagaaagtt
1381 tctcccctga agagaaggaa gagggtgaac tgatcgggcc tgtgggcact gggctggact
1441 ccagagtgat ggtgacatcc gcggcaagaa cagagttaat cctgcccgag caggacagaa
1501 aagctgacga tgaaagcaaa gggtcaggcc tgggaccaaa tgaaggctga gaggtatggc
1561 tcatcggtac aagagagatg caaaaaacta agttggaaag taaaggctac acacacatat
1621 ggagcacccc atcccacagc acattacatc cacctcactt cacagaacgg agaacagagc
1681 agaaatgacc agaacacctt tgtcaccatc acacagccct cctaaaatgg aaccaaagct
1741 tcccagctcc ctcaaagctt tggatgcaaa gaaggcaccc tgacttccac aagacaccag
1801 aattcacacg gtactcagag gcactgctgg ggaagtttgt tggtctttat tagataaatt
1861 tccagagacc tgtccataat acccaacaga acatgactgt ttctttgagg aaagggttat
1921 aatgtctgtg gtgtacaagt cgtttttggt ataacttctt tcctgctgct gctgcttccc
1981 ggcaaacata gttttcctat ttcaggcaga gtgcggtata ttccaggaaa cactgtttcc
2041 tactcactta gcttacttct ttgttgaatg cctcactaat ggcaagtttc aagatgtttt
2101 gggtgacaat gcacacatgc tgggcaaaag ggtgatggcc agtggctggc agctgggcca
2161 gcagaagcta ggacatctgt gagttgtcat tctcatctat ccatgtccac tggcctgcca
2221 gcatccgcca gtgccttgcc agtgtgcacg gtcccacact gtggcccctg agtcccctaa
2281 tgtacacgct gcagccagaa tgcagatgga gctggcttgg ctgttccctg gatgggcaat
2341 aaagaaagtg ctgcatccca aaaaaaaaaa aaa
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