LOCUS BC049197 1881 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens coiled-coil domain containing 25, mRNA (cDNA clone
MGC:51853 IMAGE:5534448), complete cds.
ACCESSION BC049197
VERSION BC049197.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1881)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1881)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922717.
FEATURES Location/Qualifiers
source 1..1881
/db_xref="H-InvDB:HIT000099056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51853 IMAGE:5534448"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1881
/gene="CCDC25"
/db_xref="GeneID:55246"
/db_xref="HGNC:HGNC:25591"
CDS 68..694
/gene="CCDC25"
/codon_start=1
/product="coiled-coil domain containing 25"
/protein_id="AAH49197.2"
/db_xref="GeneID:55246"
/db_xref="HGNC:HGNC:25591"
/translation="MVFYFTSSSVNSSAYTIYMGKDKYENEDLIKHGWPEDIWFHVDK
LSSAHVYLRLHKGENIEDIPKEVLMDCAHLVKANSIQGCKMNNVNVVYTPWSNLKKTA
DMDVGQIGFHRQKDVKIVTVEKKVNEILNRLEKTKVERFPDLAAEKECRDREERNEKK
AQIQEMKKREKEEMKKKREMDELRSYSSLMKVENMSSNQDGNDSDEFM"
BASE COUNT 608 a 327 c 427 g 519 t
ORIGIN
1 gtatcctgag cttcgtgagt tgagcgctgc tgctccgcgg tggagtcacc gcaccgctcc
61 cgggatcatg gtgttctact tcaccagcag cagcgttaat tcatctgcct acactattta
121 catgggaaaa gataaatatg aaaatgaaga tctgatcaag catggctggc ctgaagatat
181 ctggtttcat gtggacaaac tctcttcggc tcatgtatac cttcgattac ataagggaga
241 gaatatagaa gacatcccaa aggaagtgct gatggactgt gcccaccttg tgaaggccaa
301 tagcattcaa ggctgcaaga tgaacaacgt taatgtggta tatacgccgt ggtctaacct
361 gaagaaaaca gctgacatgg atgtggggca gataggcttt cacaggcaga aggatgtaaa
421 aattgtgaca gtggagaaga aagtaaatga gatcctgaac cgattagaaa agaccaaagt
481 cgagcggttc ccagacctag cagcagagaa agaatgcaga gatcgtgaag agaggaatga
541 gaaaaaagcc caaattcagg aaatgaaaaa gagagaaaaa gaagaaatga agaagaagag
601 ggaaatggat gaacttagga gctattcatc actaatgaaa gttgaaaata tgtcttcaaa
661 tcaggatggc aatgattcag atgaattcat gtaaaaggag aaaaggagaa aaggaccttt
721 gaaagatgtg aatgtagaga caattgcaga ccttttggtt tcatctgtgt tctgaagtat
781 aaaatacaac caaaattcta ccttcatcct acccagaaat tattgatttt caagttttaa
841 aaaaaatgta ccttttttgc tgacagaaaa ggatcagata tgtataaaat agttgaactt
901 gacagcatat aacttaaagt gaaaatgttt ttgccagaac atgtcttggt accttgtgaa
961 agcaggctgc ccttgttctt gagatagact ttaaaatgaa ccagctctga aaagtacttc
1021 tgctgctctg gtctatccct gaaaacagat gtcttgaaac acttttcata ttcttaaaat
1081 aatcttcact tctgttaaga agaacatgtt ggtgggtaat tatgcgaatg tttccctgtc
1141 cctgatttct cgattaggcg tatgggtttt gaaaaagaga tttttcagaa gattgtcagc
1201 ttcagtattc acgttccatc gtgtcatctg ggtctgttag tgtagtgacc ctcagtgcag
1261 tctgtcccag cgtttatgtc cttgcttcct ctgagcagag gcctccatct tagtatcaac
1321 atatttaaag aaattgatgg tgttcatcaa gctggggcct gtggcagttg ttgcctgagc
1381 accaagtaac ccaagccacc tatgtgacaa cttctgggcc caggagtaat ttctcagcat
1441 tgagggtaaa ataggatgga gtgctctgtt gatcatttgg gagatgtagg ttacctgatt
1501 tgtgccttag gatgcagcgt gaagcagaag tccatattgc aattatgatt ttagaaggaa
1561 ctaagcattt tactcacacc cacagcagca agaatgactt cctgcagcag atattccacc
1621 tgtaatagca ctttggaact gtgggcaaaa ccaaaaggct agtgtttcca tttattccat
1681 gttggtgtat ggggttgaac tggaaaattc cctgaggcaa aactcactgg ccaaattttg
1741 agagggtata gaaaatgact ttagagatga gtggttttgt gtatgtgtct gatgatattc
1801 agtctgatgt tccgcaattt taaaagttat aataaaatac cattttttta atctggaaaa
1861 aaaaaaaaaa aaaaaaaaaa a
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