LOCUS BC048812 1357 bp mRNA linear HUM 26-MAR-2019
DEFINITION Homo sapiens activator of basal transcription 1, mRNA (cDNA clone
MGC:51778 IMAGE:5574755), complete cds.
ACCESSION BC048812
VERSION BC048812.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1357)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1357)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2019) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Mar 26, 2019 this sequence version replaced BC048812.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17572813.
FEATURES Location/Qualifiers
source 1..1357
/db_xref="H-InvDB:HIT000053341"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51778 IMAGE:5574755"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1357
/gene="ABT1"
/gene_synonym="hABT1"
/db_xref="GeneID:29777"
/db_xref="HGNC:HGNC:17369"
CDS 22..840
/gene="ABT1"
/gene_synonym="hABT1"
/codon_start=1
/product="activator of basal transcription 1"
/protein_id="AAH48812.1"
/db_xref="GeneID:29777"
/db_xref="HGNC:HGNC:17369"
/translation="MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVV
PGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYT
KDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHL
AFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQ
ELRARKAARPGGRERARLATAQDKARSNKGLLARIFGAPPPSESMEGPSLVRDS"
BASE COUNT 316 a 363 c 377 g 301 t
ORIGIN
1 gtgccgctcg tgtcagtcaa catggaggca gaggaatcgg agaaggccgc aacggagcaa
61 gagccgctgg aagggacaga acagacacta gatgcggagg aggagcagga ggaatccgaa
121 gaagcggcct gtggcagcaa gaagcgggta gtgccaggta ttgtgtacct gggccatatc
181 ccgccgcgct tccggcccct gcacgtccgc aaccttctca gcgcctatgg cgaggtcgga
241 cgcgtcttct ttcaggctga ggaccggttc gtgagacgca agaagaaggc agcagcagct
301 gccggaggaa aaaagcggtc ctacaccaag gactacaccg agggatgggt ggagttccgt
361 gacaagcgca tagccaagcg cgtggcggcc agtctacaca acacgcctat gggtgcccgc
421 aggcgcagcc ccttccgtta tgatctttgg aacctcaagt acttgcaccg tttcacctgg
481 tcccacctca gcgagcacct cgcctttgag cgccaggtgc gcaggcagcg cttgagagcg
541 gaggttgctc aagccaagcg tgagaccgac ttctatcttc aaagtgtgga acggggacaa
601 cgctttcttg cggccgatgg ggaccctgct cgcccagatg gctcctggac atttgcccag
661 cgtcctactg agcaggaact gagggcccgt aaagcagcac ggccaggggg acgtgaacgg
721 gctcgcctgg caactgccca ggacaaggcc cgctccaaca aagggctcct ggccaggatc
781 tttggagccc cgccaccctc agagagcatg gagggacctt cccttgtcag ggactcctga
841 gggcctgggt ggccccttcc atttcctggc cctgctctgc ttcctgtcta cctcatacta
901 gaatgatcgt gactacccgg gcagacattt tactgtgttt ctcagaccaa gtgtctactg
961 atggcccaaa catggagttt tgtgggcttc cactgtcccc actccgaact cctgtatgtg
1021 cctggctgag tcacctaatt catactgtca tactagcata attatgacta ttgcatatgc
1081 ttgttttgtt tgactcttgg ctgcctacgt ctgtagggtc ccctgaaaat cccacttcct
1141 gcccccagaa agggccttta tttccaacta ggaggataat gcctagtcca ggcaatcttt
1201 ctctgtttag cagtcacagg tgagggtggt attagcatct tttttatgta gaaaaaattg
1261 agttaatggg gtggactggg ttgggaagaa atacatttcc taatgtattt atagaaaata
1321 aaaatatttt tatgtgcctt ttaaaaaaaa aaaaaaa
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