LOCUS BC048341 1630 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
domain 4, mRNA (cDNA clone IMAGE:5208319), partial cds.
ACCESSION BC048341
VERSION BC048341.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: j Column: 20.
FEATURES Location/Qualifiers
source 1..1630
/db_xref="H-InvDB:HIT000098990"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5208319"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1630
/gene="AGAP4"
/gene_synonym="MRIP2"
/db_xref="GeneID:119016"
/db_xref="HGNC:HGNC:23459"
CDS <1..1240
/gene="AGAP4"
/gene_synonym="MRIP2"
/codon_start=2
/product="AGAP4 protein"
/protein_id="AAH48341.1"
/db_xref="GeneID:119016"
/db_xref="HGNC:HGNC:23459"
/translation="TIGSGRAIPIKQGMLLKRSGKWLKTWKKKYVTLCSNGVLTYYSS
LGDYMKNIHKKEIDLQTSTIKVPGKWPSLATSACTPISSSKSNGLSKDMDTGLGDSIC
FSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAW
VQAIQSQIVASLQSCESSKSKSQLTSQSEAMALQSIQNMRGNAHCVDCETQNPKWASL
NLGVLMCIECSGIHHSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLANSIWEGSSQG
QTKPSEKSTREEKERWIRSKYEEKLFLAPLPCTELSLGQQLLRATADEDLQTAILLLA
HGSREEVNETCGEGDGCTALHLACRKGNVVLAQLLIWYGVDVMARDAHGNTALTYARQ
ASSQECINVLLQYGCPDECV"
BASE COUNT 499 a 403 c 389 g 339 t
ORIGIN
1 caccatcggg agcggcagag ccatccccat taaacagggc atgctcttaa agcgaagtgg
61 gaaatggctg aagacatgga aaaagaaata cgtcaccctg tgttccaatg gtgtgctcac
121 ctattattca agcttaggtg attatatgaa gaatattcat aaaaaagaga ttgaccttca
181 gacatctacc atcaaagtcc caggaaagtg gccatcccta gccacatcgg cctgcacacc
241 catctccagc tctaaaagca atggcctatc caaggacatg gacaccgggc tgggtgactc
301 catatgcttc agccccagta tctccagcac caccagcccc aagctcaacc cgcccccatc
361 tcctcatgcc aataaaaaga aacacctaaa gaagaaaagc accaacaact ttatgattgt
421 gtctgccact ggccaaacgt ggcactttga agccacgaca tatgaggagc gggatgcctg
481 ggtccaagcc atccagagcc agatcgtggc cagcctgcag tcatgcgaga gcagtaaaag
541 caagtcccag ctgaccagcc agagcgaggc catggccctg cagtcgatcc aaaacatgcg
601 tgggaacgcc cactgtgtgg actgtgagac ccagaatcct aagtgggcca gtttgaactt
661 gggagtcctc atgtgtattg aatgctcagg aatccaccac agtcttggca cccgcctttc
721 ccgtgtgcga tctctggagc tggatgactg gccagttgag ctcaggaagg ttatgtcatc
781 tattggcaat gacctagcca acagcatctg ggaagggagc agccaggggc agacaaaacc
841 ctcagaaaag tccacgaggg aagagaagga acggtggatc cgttccaaat atgaggagaa
901 gctctttctg gccccactac cctgcactga gctgtccctg ggccagcagc tgctgcgggc
961 caccgctgat gaggacctgc agacagccat cctgctgctg gcacatggct cccgtgagga
1021 ggtgaacgag acctgtgggg agggagacgg ctgcacggcg ctccatctgg cctgccgcaa
1081 ggggaatgtg gtcctggcgc agctcctgat ctggtacggg gtggacgtca tggcccgaga
1141 tgcccacggg aacacagcgc tgacctacgc ccggcaggcc tccagccagg agtgcatcaa
1201 cgtgcttctg cagtacggct gccccgacga gtgtgtatag tatctgtttt atttgactgc
1261 agtctccttg gtgcaaaaac aaaatgggaa aaataaggat aactcagaat ttcaaaagga
1321 aatcacaaat tcagctaata atagcatttt cagtactttt cgtaaactaa gtaaatacac
1381 aaaatgttga tttttctgac cataagacgt attttatgtc cttttgccaa ggtggatttg
1441 ttagtctcag gccctcctgg ccacattgcc caagtcacac aggcttctgt attatgtatt
1501 tagataaaat gtgtgaaaat atatttgaaa taaagttcat aaatatgcat tgatttttgt
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa
//