LOCUS BC048306 1739 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 3, mRNA (cDNA
clone IMAGE:5554637), partial cds.
ACCESSION BC048306
VERSION BC048306.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1739)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1739)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: p Column: 19.
FEATURES Location/Qualifiers
source 1..1739
/db_xref="H-InvDB:HIT000098964"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5554637"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1739
/gene="SENP3"
/gene_synonym="DKFZP586K0919"
/gene_synonym="SMT3IP1"
/gene_synonym="SSP3"
/db_xref="GeneID:26168"
CDS <1..1246
/gene="SENP3"
/gene_synonym="DKFZP586K0919"
/gene_synonym="SMT3IP1"
/gene_synonym="SSP3"
/codon_start=2
/product="SENP3 protein"
/protein_id="AAH48306.1"
/db_xref="GeneID:26168"
/translation="SAHPKNHLSPQQGGATPQVPSPCCRFDSPRGPPPPRLGLLGALM
AEDGVRGSPPVPSGPPMEEDGLRWTPKSPLDPDSGLLSCTLPNGFGGQSGPEGERSLA
PPDASILISNVCSIGDHVAQELFQGSDLGMAEEAERPGEKAGQHSPLREEHVTCVQSI
LDEFLQTYGSLIPLSTDEVVEKLEDIFQQEFSTPSRKGLVLQLIQSYQRMPGNAMVRG
FRVAYKRHVLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVPEKVHFFNSFFYDKLRTK
GYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKH
IAKYLQAEAVKKDRLDFHQGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFT
QQDMPKLRRQIYKELCHCKLTV"
BASE COUNT 421 a 443 c 446 g 429 t
ORIGIN
1 gtccgcacac cccaagaacc atctttcacc ccagcaaggg ggtgcgacgc cacaggtgcc
61 atccccctgt tgtcgttttg actccccccg ggggccacct ccaccccggc tgggtctgct
121 aggtgctctc atggctgagg atggggtgag agggtctcca ccagtgccct ctgggccccc
181 catggaggaa gatggactca ggtggactcc aaagtctcct ctggaccctg actcgggcct
241 cctttcatgt actctgccca acggttttgg gggacaatct gggccagaag gggagcgcag
301 cttggcaccc cctgatgcca gcatcctcat cagcaatgtg tgcagcatcg gggaccatgt
361 ggcccaggag ctttttcagg gctcagattt gggcatggca gaagaggcag agaggcctgg
421 ggagaaagcc ggccagcaca gccccctgcg agaggagcat gtgacctgcg tacagagcat
481 cttggacgaa ttccttcaaa cgtatggcag cctcataccc ctcagcactg atgaggtagt
541 agagaagctg gaggacattt tccagcagga gttttccacc ccttccagga agggcctggt
601 gttgcagctg atccagtctt accagcggat gccaggcaat gccatggtga ggggcttccg
661 agtggcttat aagcggcacg tgctgaccat ggatgacttg gggaccttgt atggacagaa
721 ctggctcaat gaccaggtga tgaacatgta tggagacctg gtcatggaca cagtccctga
781 aaaggtgcat ttcttcaata gtttcttcta tgataaactc cgtaccaagg gttatgatgg
841 ggtgaaaagg tggaccaaaa acgtggacat cttcaataag gagctactgc taatccccat
901 ccacctggag gtgcattggt ccctcatctc tgttgatgtg aggcgacgca ccatcaccta
961 ttttgactcg cagcgtaccc taaaccgccg ctgccctaag catattgcca agtatctaca
1021 ggcagaggcg gtaaagaaag accgactgga tttccaccag ggctggaaag gttacttcaa
1081 aatgaatgtg gccaggcaga ataatgacag tgactgtggt gcttttgtgt tgcagtactg
1141 caagcatctg gccctgtctc agccattcag cttcacccag caggacatgc ccaaacttcg
1201 tcggcagatc tacaaggagc tgtgtcactg caaactcact gtgtgagcct cgtaccccag
1261 accccaagcc cataaatggg aagggagaca tgggagtccc ttcccaagaa actccagttc
1321 ctttcctctc ttgcctcttc ccactcactt ccctttggtt tttcatattt aaatgtttca
1381 atttctgtat ttttttttct ttgagagaat acttgttgat ttctgatgtg cagggggtgg
1441 ctacagaaaa gcccctttct tcctctgttt gcaggggagt gtggccctgt ggcctgggtg
1501 gagcagtcat cctccccctt ccccgtgcag ggagcaggaa atcagtgctg ggggtggtgg
1561 gcggacaata ggatcactgc ctgccagatc ttcaaacttt tatatatata tatatatata
1621 tatatatata tatatatata tatatatata tatatatata tatataaaaa tatataaatg
1681 ccacggtcct gctctggtca ataaaggatc ctttgttgat acgtaaaaaa aaaaaaaaa
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