LOCUS BC048300 1722 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
domain 3, mRNA (cDNA clone IMAGE:5517750), partial cds.
ACCESSION BC048300
VERSION BC048300.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1722)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: n Column: 7.
FEATURES Location/Qualifiers
source 1..1722
/db_xref="H-InvDB:HIT000098959"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5517750"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1722
/gene="AGAP3"
/gene_synonym="CRAG"
/gene_synonym="MRIP-1"
/db_xref="GeneID:116988"
/db_xref="HGNC:HGNC:16923"
CDS <1..1214
/gene="AGAP3"
/gene_synonym="CRAG"
/gene_synonym="MRIP-1"
/codon_start=3
/product="AGAP3 protein"
/protein_id="AAH48300.1"
/db_xref="GeneID:116988"
/db_xref="HGNC:HGNC:16923"
/translation="EIDLLRTTVKVPGKRLPRATPATAPGTSPRANGLSVERSNTQLG
GGTASGPAEVLSSSPKLDPPPSPHSNRKKHRRKKSTGTPRPDGPSSATEEAEESFEFV
VVSLTGQTWHFEASTAEERELWVQSVQAQILASLQGCRSAKDKTRLGNQNAALAVQAV
RTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPEL
LAVMTAMGNALANSVWEGALGGYSKPGPDACREEKERWIRAKYEQKLFLAPLPSSDVP
LGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGDGRTALHLSSAMANVVFTQLLI
WYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCPGEGCGLAPTPNREPANGTNP
SAELHRSPSLL"
BASE COUNT 386 a 485 c 554 g 297 t
ORIGIN
1 aggagattga cctgctgcgg acaacggtga aagtgccagg gaagcgcctg ccccgagcca
61 cacctgccac agccccgggc accagccccc gtgccaacgg gctgtccgtg gagcggagta
121 acacacagct gggtgggggc acagccagtg gcccagctga ggtactcagt tccagcccca
181 agctggatcc tcccccatct ccccactcca accggaagaa gcaccggagg aaaaagagca
241 ccgggacccc ccgaccagac ggccccagca gtgctactga agaggcagag gagtcgtttg
301 aatttgtggt ggtgtccctc actgggcaga cgtggcactt cgaggcttca acggcggagg
361 agcgggagct gtgggttcag agtgtgcagg cccagatcct tgccagcctg caaggctgcc
421 gcagtgccaa ggacaagact cgactgggga accagaacgc agctctggct gtgcaggccg
481 tccgcaccgt ccgcggcaac agcttttgta tcgactgcga tgcacccaat ccagactggg
541 ccagcctgaa cctgggtgcc ctgatgtgca ttgagtgctc aggcatccac cgacacctgg
601 gggctcacct gtcccgggtg cgctcccttg acctcgatga ctggccgcct gagctgctgg
661 ctgtcatgac tgccatgggc aatgccctcg ccaacagcgt ctgggagggg gccttgggtg
721 gctactccaa gccagggcct gatgcctgca gagaggagaa ggaacgctgg atacgggcca
781 agtatgaaca gaagctcttc ctggccccac tgccaagctc agatgtgcca ctggggcagc
841 agctgctccg ggccgtggtg gaagatgacc tgcggctgtt ggtgatgctc ctggcacatg
901 gctccaaaga ggaggtgaat gagacctatg gggacgggga cgggcggacg gctctacatc
961 tctccagtgc catggccaac gttgtcttca cgcagctgct catctggtac ggggtggacg
1021 tgaggagccg ggacgcccgg ggcctgactc cactggcata tgctcgccgg gccggcagcc
1081 aggagtgtgc agacatcttg atccagcatg gctgccctgg ggagggctgt ggcttagcgc
1141 ctacccccaa cagagagcct gccaatggca ccaacccctc tgctgagctg caccgtagtc
1201 ctagcctcct ataaggccca ggaagagggc agaggggcca gaaggactcc atggcccaaa
1261 gaccctcctc cctgcaggca ctgtgggaac agacacagag atggagaagc agggacatgc
1321 tgagaggacg aagccaagga aattagggag gagagtcaaa gggatcaagg agagttgggg
1381 atttgagctg cagcagagag ggatgaggga tttagccctc tgccctaagg tgccattgaa
1441 aagggacagg acccttcgga ggtgcctgtg aggagagggg agcaggacct ctccctcctc
1501 cagatccctg cctcctagtg ccagcccctc acacgccttc atcctgaaac aggaagagga
1561 cggcaccaag ttgggggtgc tggatgaaag agacgagggg tgatctgtga gtcccatgta
1621 aactttgtac attggaatat ttatgtttgt gtacatattt gatgtgtgtg tgtatgatga
1681 gccaataaac cagactgtgt gcgtggcaaa aaaaaaaaaa aa
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