LOCUS BC048252 1902 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens GTF2I repeat domain containing 2B, mRNA (cDNA clone
IMAGE:4445948), partial cds.
ACCESSION BC048252
VERSION BC048252.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1902)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1902)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: c Column: 24.
FEATURES Location/Qualifiers
source 1..1902
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4445948"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1902
/gene="GTF2IRD2B"
/db_xref="GeneID:389524"
/db_xref="HGNC:HGNC:33125"
/db_xref="MIM:608900"
CDS <1..1337
/gene="GTF2IRD2B"
/codon_start=3
/product="GTF2IRD2B protein"
/protein_id="AAH48252.1"
/db_xref="GeneID:389524"
/db_xref="HGNC:HGNC:33125"
/db_xref="MIM:608900"
/translation="PEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSI
AIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFC
INWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKL
KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRF
FESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMY
DLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSD
FKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGS
YPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT"
BASE COUNT 540 a 450 c 438 g 474 t
ORIGIN
1 gtcccgagca aaaacaagtg tttgcaaacc caagtccaac ccagaaatcc cccgtgcagc
61 ctgtagagga cctagctggg aacttatggg agaagttacg tgaaaaaatc aggtcttttg
121 tggcatattc tatcgcaatc gatgagatca cggatataaa taataccacc cagttggcca
181 tattcatccg tggtgtcgat gagaatttcg atgtgtccga agaacttctg gacacggtgc
241 ccatgacggg tacaaaatct ggcaacgaga tctttttgcg tgttgagaag agcctgaaaa
301 agttctgtat caactggtcg agattagtaa gcgtggcctc cactggcacc ccagcgatgg
361 tggatgccaa taacgggctt gtcacaaaac tgaagtccag ggtggcgacg ttctgcaagg
421 gtgcggaact gaagtccatc tgttgtataa ttcatccgga atcactctgt gctcagaagt
481 tgaagatgga ccacgtcatg gacgtggtag tgaagtccgt gaactggata tgctcccggg
541 gactgaacca cagcgagttc acaaccttgc tctatgagct ggacagccag tatggtagcc
601 tcctgtacta cacggagatt aagtggctca gtcgcgggct cgtgctaaag agatttttcg
661 aatccttgga agaaatcgac tccttcatgt catccagagg gaaacccctg cctcaactga
721 gctccataga ttggatccga gacctggcct tcttggttga catgacgatg catctgaacg
781 ctttgaacat ctctctccaa ggacactccc aaatcgtcac gcagatgtat gacctgatcc
841 gggcgttcct agcaaaactg tgcctctggg agactcattt gacgaggaat aatctggccc
901 actttcccac cctgaaattg gtttccagaa atgaaagcga tggcctgaac tacattccca
961 aaatcgcgga actcaagacc gaattccaga aaaggctgtc tgatttcaaa ctctacgaaa
1021 gcgaactgac tctgttcagc tccccgttct ccacgaagat cgacagtgtg cacgaggagc
1081 tccagatgga ggttatcgac ctgcaatgca acacggtcct gaagacgaaa tacgacaagg
1141 tgggaatacc agaattctac aagtacctct ggggtagcta cccgaaatac aagcaccatt
1201 gcgcaaagat tctttccatg ttcgggagca cctacatctg cgaacagctg ttctccatta
1261 tgaaactgag caaaacaaaa tactgctccc agttaaagga ttcccagtgg gattctgtac
1321 tccacatcgc aacgtgatgg agagaaaact cctggcaggg ccctatggtg ggaaaggctg
1381 gagtcttcta gtcccaaggg attgggagat gacaaaatga attttttttt tcttttttga
1441 gatggagtct tgctctgtcg cccaggttgg agtgcagtgg cgtgatctcg gcttactgca
1501 acttccagct cctgggttcg aacgattctc ctgcctcagc ctcccgagca gctgggacta
1561 caggcatgcg ccaccatgcc cggctaattt ttgtattagt agagatgagg tttcaccatg
1621 ttggccaggc tggtctccaa ctcctgacct caggtgatcc acctgcctcg acctcacaaa
1681 gtgctgggat tacaggcatg aaccactgtg cccagctgac aaaatgagtt cttaaacttt
1741 tttttttttc agtttttttt ccactttgaa tcagaaatat aatctgcagt atcatacttg
1801 tttatattac attgtatgcc tcactattca ttaaaaatca agaaagtttt attgtaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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