LOCUS BC047953 1399 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens cornichon homolog 2 (Drosophila), mRNA (cDNA clone
IMAGE:6020681), complete cds.
ACCESSION BC047953
VERSION BC047953.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: l Column: 13
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1399
/db_xref="H-InvDB:HIT000053287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6020681"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1399
/gene="CNIH2"
/gene_synonym="Cnil"
/gene_synonym="MGC50896"
/db_xref="GeneID:254263"
/db_xref="HGNC:HGNC:28744"
CDS 233..715
/gene="CNIH2"
/gene_synonym="Cnil"
/gene_synonym="MGC50896"
/codon_start=1
/product="cornichon homolog 2 (Drosophila)"
/protein_id="AAH47953.1"
/db_xref="GeneID:254263"
/db_xref="HGNC:HGNC:28744"
/translation="MAFTFAAFCYMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQ
GNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHL
WRYFHRPADGSEVMYDAVSIMNADILNYCQKESWCKLAFYLLSFFYYLYSMVYTLVSF
"
BASE COUNT 283 a 495 c 371 g 250 t
ORIGIN
1 cgcaggatga gcgatcgggg cccgggcagc cggcagcgga cgcgcccccc gagcccaccg
61 gcccgcgccc cgcgcccccc acggccccgc ggtcccggtc ccggccgcat cacccacgtc
121 ccccgagccc cacgggccat gcccggccgg ccctaagcgc gggccggggg gcgtcccctt
181 gcgcccgggc cccgcgctgg cgccccccgg gccgccgccc ggcgcggggg ccatggcgtt
241 caccttcgcc gcgttctgct acatgctcac cctggtgctg tgcgcctccc tcatcttctt
301 tgtcatctgg cacatcatag cctttgatga gctgcggacc gacttcaaga accccatcga
361 ccaggggaac cctgcgcggg cacgcgagcg tttaaaaaac atcgaacgca tctgctgcct
421 cctgaggaag ctggtggtcc cagaatactc catccacggc ctcttctgtc tgatgtttct
481 gtgtgcagca gagtgggtga ccctgggcct caacatcccc ctcctcttct accacctctg
541 gaggtacttc caccgtcctg cagatggctc tgaggtcatg tatgatgcgg tctccatcat
601 gaatgctgac attctcaact actgccagaa ggagtcctgg tgcaaacttg ccttctacct
661 gctctccttc ttctattacc tgtacagtat ggtttatacg ttggtgagtt tctaaggggg
721 aagccggcca gggagcgagc ccagaacgga ccggacgcct gtgcaccccc agccctgccc
781 cttggccgca gaggcctcag ccctggggag ggagggggca ctggtgcccc cagcctctcc
841 aacccccaaa ctgctgctgc ggggaacccc ccccaccccg ccttcagagc cctccccctt
901 ggactagagc ggctgggcag agctctaaac aggggcaggg gctcctctgc cagcctgtgg
961 gcatggcagt cattcctgga aggggcagga cctccggcct tgtccatttc gggggaaact
1021 tgggccctgc caaggggcag agcttgaccc tggaaattct gggccatccc cctccacccc
1081 caccctgagg ctccccctgc aggtgggggg gtacccgcac cgggaatgag caggctcagc
1141 aggggggcag ccccacccct agtctgccct cccctctccc ccaggctctt tctccagccc
1201 tgtctccatc tgccccaacc tcagcccacc ttgtctcttg gacctatttt ctatgtcgcc
1261 tggaggagtc cggcaccccc tccccggcca tttgtgacaa aatatgaata aactactgca
1321 aatatgtggg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaa
//