LOCUS BC047901 3277 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens actinin, alpha 2, mRNA (cDNA clone MGC:57723
IMAGE:6199155), complete cds.
ACCESSION BC047901
VERSION BC047901.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3277)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3277)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC047901.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4501892.
FEATURES Location/Qualifiers
source 1..3277
/db_xref="H-InvDB:HIT000053271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57723 IMAGE:6199155"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3277
/gene="ACTN2"
/db_xref="GeneID:88"
/db_xref="HGNC:HGNC:164"
/db_xref="MIM:102573"
CDS 153..2837
/gene="ACTN2"
/codon_start=1
/product="actinin, alpha 2"
/protein_id="AAH47901.2"
/db_xref="GeneID:88"
/db_xref="HGNC:HGNC:164"
/db_xref="MIM:102573"
/translation="MNQIEPGVQYNYVYDEDEYMIQEEEWDRDLLLDPAWEKQQRKTF
TAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERLPKPDRGKMRFHKIANVNK
ALDYIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLW
CQRKTAPYRNVNIQNFHTSWKDGLGLCALIHRHRPDLIDYSKLNKDDPIGNINLAMEI
AEKHLDIPKMLDAEDIVNTPKPDERAIMTYVSCFYHAFAGAEQAETAANRICKVLAVN
QENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPK
VQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNE
IRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESD
LAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERME
KLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLP
EADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQS
LQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYE
HNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVET
QILTRDAKGITQEQMNEFRASFNHFDRRKNGLMDHEDFRACLISMGYDLGEAEFARIM
TLVDPNGQGTVTFQSFIDFMTRETADTDTAEQVIASFRILASDKPYILAEELRRELPP
DQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGESDL"
BASE COUNT 922 a 806 c 903 g 646 t
ORIGIN
1 ccagcgccca ggcgtgtcgc cccgagagga gccgcgcgaa ggtcaccccg cgcccgccgc
61 ccgccgcccg ccgcctccgt gggtccgttt gccagtcagc ccgtgcgtcc gagcccctcg
121 cgccccgccg cagccccggc caaccgagcg ccatgaacca gatagagccc ggcgtgcagt
181 acaactacgt gtacgacgag gatgagtaca tgatccagga ggaggagtgg gaccgcgacc
241 tgctcctgga cccagcctgg gagaagcagc agaggaagac cttcactgcc tggtgtaact
301 cccacctaag gaaagccggc acccagattg agaacatcga ggaagacttc aggaatggcc
361 ttaagctcat gctgcttttg gaagtcatct caggggaaag gctgcccaaa cctgaccggg
421 gaaaaatgcg gttccacaaa attgctaatg tcaacaaagc tttggattac atagccagca
481 aaggggtgaa actggtgtcc atcggcgctg aagaaattgt tgatggcaat gtgaaaatga
541 ccctgggtat gatctggacc atcatccttc gctttgctat tcaggatatt tcggttgaag
601 aaacatctgc caaagaaggt ctgctgcttt ggtgtcagag gaaaactgct ccttatagaa
661 atgtgaacat tcagaacttc catactagct ggaaagatgg ccttggactc tgtgccctca
721 tccaccgaca ccggcctgac ctcattgact actcaaagct taacaaggat gaccccatag
781 gaaatattaa cctggccatg gaaatcgctg agaagcacct ggatattcct aaaatgttgg
841 atgctgaaga catcgtgaac acccctaaac ccgatgaaag agccatcatg acgtacgtct
901 cttgcttcta ccacgctttt gcgggcgcgg agcaggccga gacagcggct aacaggatat
961 gtaaggttct tgctgtgaat caagagaatg agaggctgat ggaagaatat gagaggctag
1021 cgagtgagct tttggaatgg attcgtcgca cgatcccctg gctggagaac cggactcccg
1081 agaagaccat gcaagccatg cagaagaagc tggaggactt ccgggattac cgccggaagc
1141 acaagccacc caaggtgcag gagaaatgcc agctggagat caacttcaac acgctgcaga
1201 ccaagctgcg gatcagcaac cgtcctgcct tcatgccctc cgagggcaag atggtgtcgg
1261 atattgctgg tgcctggcag aggctggagc aggctgagaa gggttacgag gagtggttgc
1321 tcaatgagat tcggagactg gagcgcttgg aacacctggc tgagaagttc aggcagaagg
1381 cctcaacgca cgagacttgg gcttatggca aagagcagat cttgctgcag aaggattacg
1441 agtcggcgtc gctgacagag gtgcgggctc tgctgcggaa gcacgaggcg ttcgagagcg
1501 acctggcagc gcaccaggac cgcgtggagc agatcgcagc catcgcgcag gagctcaatg
1561 aactggacta tcacgacgct gtgaatgtca atgatcggtg ccagaaaatt tgtgaccagt
1621 gggaccgact gggaacgctt actcagaaga ggagagaagc cctagagaga atggagaaat
1681 tgctagaaac cattgatcag cttcacctgg agtttgccaa gagggctgct cctttcaaca
1741 attggatgga gggcgctatg gaggatctgc aagatatgtt cattgtccac agcattgagg
1801 agatccagag tctgatcact gcgcatgagc agttcaaggc cacgctgccc gaggcggacg
1861 gagagcggca gtccatcatg gccatccaga acgaggtgga gaaggtgatt cagagctaca
1921 acatcagaat cagctcaagc aacccgtaca gcactgtcac catggatgag ctccggacca
1981 agtgggacaa ggtgaagcaa ctcgtgccca tccgcgatca atccctgcag gaggagctgg
2041 ctcgccagca tgctaacgag cgtctgaggc gccagtttgc tgcccaagcc aatgccattg
2101 ggccctggat ccagaacaag atggaggaga ttgcccggag ctccatccag atcacaggag
2161 ccctggaaga ccagatgaac cagctgaagc agtatgagca caacatcatc aactataaga
2221 acaacatcga caagctggag ggagaccatc agctcatcca ggaggccctt gtctttgaca
2281 acaagcacac gaactacacg atggagcaca ttcgtgttgg atgggagctg ctgctgacaa
2341 ccatcgccag aaccatcaat gaggtggaga ctcagatcct gacgagagat gcgaagggca
2401 tcacccagga gcagatgaat gagttcagag cctccttcaa ccactttgac aggaggaaga
2461 atggcctgat ggatcatgag gatttcagag cctgcctgat ttccatgggt tatgacctgg
2521 gtgaagccga atttgcccgc attatgaccc tggtagatcc caacgggcaa ggcaccgtca
2581 ccttccaatc cttcatcgac ttcatgacta gagagacggc tgacaccgac actgccgagc
2641 aggtcatcgc ctccttccgg atcctggctt ctgataagcc atacatcctg gcggaggagc
2701 tgcgtcggga gctgcccccg gatcaggccc agtactgcat caagaggatg cccgcctact
2761 cgggcccagg cagtgtgcct ggtgcactgg attacgctgc gttctcttcc gcactctacg
2821 gggagagcga tctgtgatgc tgagcttctg taatcactca tcccatcaga atgcaataaa
2881 agcggaagtc acagtttgtt tcctggaaac tttgacaagc tttattaagt tgagagagag
2941 agagggggaa aaaaaaagcc tttcgtagtt cagtaattgc cagcaatata acacggctaa
3001 aatgaagttt ttacagtata tgacatagtg cgcttcataa ataggtttat ttctgagttt
3061 ttagcaaaat gtaatgaaat atcaggttga tttctttgat taaacagaac aaattacttg
3121 agtaatagga aattaggagg atctagggac agaaggaaag tgaaaaatgt gaaaatacaa
3181 aatacccaag atttaagacc ggggggaaaa aaccacaaat tggtaaataa aggtttgcta
3241 tttgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//