LOCUS BC047889 1555 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens actin related protein 2/3 complex, subunit 1A, 41kDa,
mRNA (cDNA clone MGC:57658 IMAGE:6473050), complete cds.
ACCESSION BC047889
VERSION BC047889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1555)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907051.
FEATURES Location/Qualifiers
source 1..1555
/db_xref="H-InvDB:HIT000098818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57658 IMAGE:6473050"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1555
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
CDS 95..1207
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/codon_start=1
/product="actin related protein 2/3 complex, subunit 1A,
41kDa"
/protein_id="AAH47889.2"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
/translation="MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVK
AHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFV
KWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAG
SCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSR
LAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDD
RGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYE
VDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM"
BASE COUNT 415 a 376 c 386 g 378 t
ORIGIN
1 cgcgtcgact gcccagagtc cgcgaatcct ccgctccgag cccgtccgga ctcccccgat
61 cccagctttc tctcctttga aaacactaag aataatgtca ctgcatcagt ttttactaga
121 gccaatcacc tgtcatgcct ggaacaggga tcgtactcag attgccctca gtcccaataa
181 tcacgaagtg cacatctata agaagaacgg gagccagtgg gtgaaagctc atgaactcaa
241 ggagcacaac ggacacatca caggtattga ctgggctccc aagagcgacc gcattgtcac
301 ttgtggggca gaccgcaatg cctatgtctg gagtcagaaa gatggtgttt ggaagccaac
361 cctggtgatc ctgagaatta atcgcgcagc tacttttgtg aagtggtccc ccctagagaa
421 caaatttgct gtgggaagtg gagcacgact catttctgtt tgttactttg agtctgaaaa
481 tgactggtgg gtgagcaagc acattaaaaa gccgattcgc tccacagtcc tcagcttgga
541 ttggcatccc aacaacgttt tgctggcagc aggatcatgt gacttcaaat gcagagtgtt
601 ttctgcctac attaaagaag tggatgaaaa gccagccagc acgccctggg gcagcaagat
661 gccttttggg cagctgatgt cagagtttgg tggcagtggc actggtggct gggtccacgg
721 ggtaagcttc tctgccagtg ggagccgcct ggcctgggtc agccacgaca gcaccgtgtc
781 tgttgctgat gcctcaaaaa gtgtgcaggt ctcgactctg aagacagagt tcctgccgct
841 cctaagtgtg tcatttgtct cagagaacag cgtcgtggct gctggccatg actgctgccc
901 aatgctcttt aactacgatg accgcggctg cctgaccttc gtctccaagt tagatattcc
961 aaaacagagc atccaacgca acatgtctgc catggaacgc ttccgcaaca tggacaagag
1021 agccacaact gaggaccgca acacggcctt ggagacgctg caccagaata gcatcactca
1081 agtctctatt tatgaggtgg acaagcaaga ttgtcgcaaa ttttgcacta ctggcatcga
1141 tggagccatg acaatttggg atttcaagac cctcgagtct tccatccagg gcctccggat
1201 aatgtgaagc tgagtgagcc tccgccatcc agcatgacaa actgtggccg accgcagctg
1261 tgccgtggca cgatggcgag gaagccagcc ccaaggaaac actgaaaaca catatcacgc
1321 caatgccgtg tggttttgtt tgaatataaa attggtgaaa gtgttggttt ttttaaggca
1381 gtaatttttt tgtttgtttt tttgcgattt cattccattc ttgaccaaag cttctcttta
1441 agtagtttat tatggaaaat tgtcacacta acttaaaaga cagggtgagg gagatatgta
1501 aattgtccac tagaaaatta aataaaagaa ctgaatgtgg aaaaaaaaaa aaaaa
//