LOCUS BC047876 3096 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein kinase C, gamma, mRNA (cDNA clone MGC:57564
IMAGE:5764695), complete cds.
ACCESSION BC047876
VERSION BC047876.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3096)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: j Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47132626.
FEATURES Location/Qualifiers
source 1..3096
/db_xref="H-InvDB:HIT000053264"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57564 IMAGE:5764695"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3096
/gene="PRKCG"
/gene_synonym="MGC57564"
/gene_synonym="PKC-gamma"
/gene_synonym="PKCC"
/db_xref="GeneID:5582"
/db_xref="HGNC:HGNC:9402"
/db_xref="MIM:176980"
CDS 187..2280
/gene="PRKCG"
/gene_synonym="MGC57564"
/gene_synonym="PKC-gamma"
/gene_synonym="PKCC"
/codon_start=1
/product="protein kinase C, gamma"
/protein_id="AAH47876.1"
/db_xref="GeneID:5582"
/db_xref="HGNC:HGNC:9402"
/db_xref="MIM:176980"
/translation="MAGLGPGVGDSEGGPRPLFCRKGALRQKVVHEVKSHKFTARFFK
QPTFCSHCTDFIWGIGKQGLQCQVCSFVVHRRCHEFVTFECPGAGKGPQTDDPRNKHK
FRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERRGR
LQLEIRAPTADEIHVTVGEARNLIPMDPNGLSDPYVKLKLIPDPRNLTKQKTRTVKAT
LNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSELLKAPVDGWYK
LLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPSPTDP
KRCFFGASPGRLHISDFSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIVQDDD
VDCTLVEKRVLALGGRGPGGRPHFLTQLHSTFQTPDRLYFVMEYVTGGDLMYHIQQLG
KFKEPHAAFYAAEIAIGLFFLHNQGIIYRDLKLDNVMLDAEGHIKITDFGMCKENVFP
GTTTRTFCGTPDYIAPEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDEEELFQA
IMEQTVTYPKSLSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWIDWERLER
LEIPPPFRPRPCGRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFVH
PDARSPTSPVPVPVM"
BASE COUNT 620 a 1027 c 818 g 631 t
ORIGIN
1 gccggcgcgc ccggggtgcc gctccctgcc tggcgcgctc cgcacctgga ggtgccttgc
61 ccctctcctg cccacctcgg aatttccctg tggctccttt gatccttcga gtctccagct
121 cctctccctt ccacctgttt cccccaagaa aggcaggatc ctggtccctg ctacgtttct
181 ggggccatgg ctggtctggg ccccggcgta ggcgattcag aggggggacc ccggcccctg
241 ttttgcagaa agggggccct gaggcagaag gtggtccacg aagtcaagag ccacaagttc
301 accgctcgct tcttcaagca gcccaccttc tgcagccact gcaccgactt catctggggt
361 atcggaaagc agggcctgca atgtcaagtc tgcagctttg tggttcatcg acgatgccac
421 gaatttgtga ccttcgagtg tccaggcgct gggaagggcc cccagacgga tgacccccgg
481 aacaaacaca agttccgcct gcatagctac agcagcccca ccttctgcga ccactgtggc
541 tccctcctct acgggcttgt gcaccagggc atgaaatgct cctgctgcga gatgaacgtg
601 caccggcgct gtgtgcgtag cgtgccctcc ctgtgcggtg tggaccacac cgagcgccgc
661 gggcgcctgc agctggagat ccgggctccc acagcagatg agatccacgt aactgttggc
721 gaggcccgta acctaattcc tatggacccc aatggtctct ctgatcccta tgtgaaactg
781 aagctcatcc cagaccctcg gaacctgacg aaacagaaga cccgaacggt gaaagccacg
841 ctaaaccctg tgtggaatga gacctttgtg ttcaacctga agccagggga tgtggagcgc
901 cggctcagcg tggaggtgtg ggactgggac cggacctccc gcaacgactt catgggggcc
961 atgtcctttg gcgtctcgga gctgctcaag gcgcccgtgg atggctggta caagttactg
1021 aaccaggagg agggcgagta ttacaatgtg ccggtggccg atgctgacaa ctgcagcctc
1081 ctccagaagt ttgaggcttg taactacccc ctggaattgt atgagcgggt gcggatgggc
1141 ccctcttcct ctcccatccc ctccccttcc cctagtccca ccgaccccaa gcgctgcttc
1201 ttcggggcga gtccaggacg cctgcacatc tccgacttca gcttcctcat ggttctagga
1261 aaaggcagtt ttgggaaggt gatgctggcc gagcgcaggg gctctgatga gctctacgcc
1321 atcaagatct tgaaaaagga cgtgatcgtc caggacgacg atgtggactg cacgctggtg
1381 gagaaacgtg tgctggcgct ggggggccgg ggtcctggcg gccggcccca cttcctcacc
1441 cagctccact ccaccttcca gaccccggac cgcctgtatt tcgtgatgga gtacgtcacc
1501 gggggagact tgatgtacca cattcaacag ctgggcaagt ttaaggagcc ccatgcagcg
1561 ttctacgcgg cagaaatcgc tatcggcctc ttcttccttc acaatcaggg catcatctac
1621 agggacctga agctggacaa tgtgatgctg gatgctgagg gacacatcaa gatcactgac
1681 tttggcatgt gtaaggagaa cgtcttcccc gggacgacaa cccgcacctt ctgcgggacc
1741 ccggactaca tagccccgga gatcattgcc taccagccct atgggaagtc tgtcgattgg
1801 tggtcctttg gagttctgct gtatgagatg ttggcaggac agcctccctt cgatggggag
1861 gacgaggagg agctgtttca ggccatcatg gaacaaactg tcacctaccc caagtcgctt
1921 tcccgggaag ccgtggccat ctgcaagggg ttcctgacca agcacccagg gaagcgcctg
1981 ggctcagggc ctgatgggga acctaccatc cgtgcacatg gctttttccg ctggattgac
2041 tgggagcggc tggaacgatt ggagatcccg cctcctttca gaccccgccc gtgtggccgc
2101 agcggcgaga actttgacaa gttcttcacg cgggcggcgc cagcgctgac ccctccagac
2161 cgcctagtcc tggccagcat cgaccaggcc gatttccagg gcttcaccta cgtgaacccc
2221 gacttcgtgc acccggatgc ccgcagcccc accagcccag tgcctgtgcc cgtcatgtaa
2281 tctcacccgc cgccactagg tgtccccaac gtcccctccg ccgtgccggc ggcagcccca
2341 cttcaccccc aacttcacca ccccctgtcc cattctagat cctgcacccc agcattccag
2401 ctctgccccc gcgggttcta gacgcccctc ccaagcgttc ctggccttct gaactccata
2461 cagcctctac agccgtcccg cgttcaagac ttgagcggag cccgatattc tccctgacct
2521 tagcgttctg gactctgccc caatcgggtc cagagaccac accactaacc atccccaact
2581 ccatggggtt cgagactcca tcttggtagt tctgtgcctc cccccagacc ccgcccctgg
2641 ggaaatagcc tcacggggtt ggctgttcca gactcaggtt ccagaacagc cctcggcctc
2701 cgaggctccc cgcctccact ctagttctag atgagtggga ggcgtgcccc cctcctccag
2761 tacgtcccgc tgctgtgctc tggggatttc tgggatatat ggaggattct ttccccagag
2821 gctcccaatc agcttttgtt ctagacttcc ccatcccgaa gccatcactt ctccccgcag
2881 cccgcctgcc gtgcatggct cctgtctggc tcggacccac cccaactctc cccagtgcct
2941 gccactctct gggactctcc tcctcccctc ctcttccctt agcctctccc acccggccac
3001 agctgctgga gaataaattt gggatgctga tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//