LOCUS BC047775 996 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 46, mRNA (cDNA clone
MGC:54274 IMAGE:6062049), complete cds.
ACCESSION BC047775
VERSION BC047775.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748692.
FEATURES Location/Qualifiers
source 1..996
/db_xref="H-InvDB:HIT000053251"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54274 IMAGE:6062049"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..996
/gene="C11orf46"
/gene_synonym="dJ299F11.1"
/gene_synonym="FLJ38968"
/db_xref="GeneID:120534"
/db_xref="HGNC:HGNC:26798"
CDS 156..938
/gene="C11orf46"
/gene_synonym="dJ299F11.1"
/gene_synonym="FLJ38968"
/codon_start=1
/product="chromosome 11 open reading frame 46"
/protein_id="AAH47775.1"
/db_xref="GeneID:120534"
/db_xref="HGNC:HGNC:26798"
/translation="MMDPCSVGVQLRTTNECHKTYYTRHTGFKTLQELSSNDMLLLQL
RTGMTLSGNNTICFHHVKIYIDRFEDLQKSCCDPFNIHKKLAKKNLHVIDLDDATFLS
AKFGRQLVPGWKLCPKCTQIINGSVDVDTEDRQKRKPESDGRTAKALRSLQFTNPGRQ
TEFAPETGKREKRRLTKNATAGSDRQVIPAKSKVYDSQGLLIFSGMDLCDCLDEDCLG
CFYACPACGSTKCGAECRCDRKWLYEQIEIEGGEIIHNKHAG"
BASE COUNT 351 a 174 c 228 g 243 t
ORIGIN
1 gcggggactg gctgggaagc ggtcggtcga gtgtggcctg tgtggactcg catcttgccc
61 gaagccgggc ggaggagagc tcaagctaag ggtgatcagc ccatgaccta aacctccaga
121 caaaataaaa cagggaaaat ttgctagaat caagaatgat ggatccatgt tcagttggag
181 tccagcttcg tactacaaat gagtgccata aaacctacta tactcgtcac acaggtttta
241 agactttgca agaattgtca tcaaatgata tgcttttact tcaacttaga actggaatga
301 cactttctgg gaacaataca atttgctttc atcatgtaaa aatttacatt gacagatttg
361 aggatttaca gaagtcatgt tgtgacccat ttaacataca caagaaatta gccaaaaaaa
421 atttgcatgt aattgactta gatgatgcca cttttctgag tgctaaattt ggaagacagc
481 ttgtacctgg ttggaagctt tgtccaaaat gcacacagat aatcaatgga agtgtggatg
541 ttgatactga agaccgccag aaaaggaaac ctgagtcaga tggaagaact gctaaagctt
601 tgaggtcatt acaatttacg aatccaggaa ggcaaactga atttgctcca gaaactggta
661 aaagagaaaa aagaaggctt acaaaaaatg caaccgctgg ttcagacaga caagtgatac
721 cagcaaagag taaggtctat gatagccagg gtctcctgat ttttagtggg atggacctct
781 gtgactgcct ggatgaagac tgcttaggat gtttctatgc ttgtcctgcc tgtggttcta
841 ccaagtgtgg agctgaatgc cgctgtgacc gcaagtggct gtatgagcaa attgaaattg
901 aaggaggaga aataattcat aataaacatg ctggataatc tgcggtacca aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//