LOCUS BC047703 1701 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens phospholipase A1 member A, mRNA (cDNA clone MGC:51964
IMAGE:6061929), complete cds.
ACCESSION BC047703
VERSION BC047703.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1701)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1701)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC047703.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1701
/db_xref="H-InvDB:HIT000053213"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51964 IMAGE:6061929"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1701
/gene="PLA1A"
/gene_synonym="PS-PLA1"
/gene_synonym="PSPLA1"
/db_xref="GeneID:51365"
/db_xref="MIM:607460"
CDS 19..1341
/gene="PLA1A"
/gene_synonym="PS-PLA1"
/gene_synonym="PSPLA1"
/codon_start=1
/product="PLA1A protein"
/protein_id="AAH47703.1"
/db_xref="GeneID:51365"
/db_xref="MIM:607460"
/translation="MPPGPWESCFWVGGLILWLSVGSSGDAPPTPQPKCADFQSANLF
EGTDLKVQFLLFVPSNPSCGQLVEGSSDLQNSGFNATLGTKLIIHGFRVLGTKPSWID
TFIRTLLRATNANVIAVDWIYGSTGVYFSAVKNVLGVSESSIHIIGVSLGAHVGGMVG
QLFGGQLGQITGLDPAGPEYTRASVEERLDAGDALFVEAIHTDTDNLGIRIPVGHVDY
FVNGGQDQPGCPTFFYAGYSYLICDHMRAVHLYISALENSCPLMAFPCASYKAFLAGR
CLDCFNPFLLSCPRIGLVEQGGVKIEPLPKEVKVYLLTTSSAPYCMHHSLVEFHLKEL
RNKDTNIEVTFLSSNITSSSKITIPKQQRYGKGIIAHATPQCQINQVKFKFQSSNRVW
KKDRTTIIGKFCTALLPVNDREKMVCLPEPVNLQASVTVSCDLKIACV"
misc_feature 64..978
/gene="PLA1A"
/gene_synonym="PS-PLA1"
/gene_synonym="PSPLA1"
/note="lipase; Region: Lipase"
/db_xref="CDD:pfam00151"
BASE COUNT 430 a 417 c 401 g 453 t
ORIGIN
1 gagatttcca gctcagcgat gcccccaggt ccctgggaga gctgcttctg ggtggggggc
61 ctcattttgt ggctcagcgt tggaagttca ggggatgcac ctcctacccc acagccaaag
121 tgcgctgact tccagagcgc caaccttttt gaaggcaccg atctcaaagt ccagtttctc
181 ctctttgtcc cttcgaatcc tagctgtggg cagctagtag aaggaagcag tgacctccaa
241 aactctgggt tcaatgccac tctgggaacc aaactaatta tccatggatt cagggtttta
301 ggaacaaagc cttcctggat tgacacattt attagaaccc ttctgcgtgc aacgaatgct
361 aatgtgattg ccgtggactg gatttatggg tctacaggag tctacttctc agctgtgaaa
421 aatgtgctgg gtgtgtcgga atcctcaatc cacatcattg gtgttagcct gggggcccac
481 gttgggggca tggtgggaca gctcttcgga ggccagctgg gacagatcac aggcctggac
541 cccgctggac ctgagtacac cagggccagt gtggaagagc gcttggatgc tggagatgcc
601 ctcttcgtgg aagccatcca cacagacacc gacaatttgg gtattcggat tcccgttgga
661 catgtggact acttcgtcaa cggaggccaa gaccaacctg gctgccccac cttcttttac
721 gcaggttata gttatctgat ctgtgatcac atgagggctg tgcacctcta catcagcgcc
781 ctggagaatt cctgtccact gatggccttt ccctgtgcca gctacaaggc cttccttgct
841 ggacgctgtc tggattgctt taaccctttt ctgctttcct gcccaaggat aggactggtg
901 gaacaaggtg gtgtcaagat agagccgctc cccaaggaag tgaaagtcta cctcctgact
961 acttccagtg ctccgtactg catgcatcac agcctcgtgg agtttcactt gaaggaactg
1021 agaaacaagg acaccaacat cgaggttacc ttccttagca gtaacatcac ctcttcatct
1081 aagatcacca tacctaagca gcaacgctat gggaaaggaa tcatagccca tgccacccca
1141 caatgccaga taaaccaagt gaaattcaag tttcagtctt ccaaccgagt ttggaaaaaa
1201 gaccggacta ccattattgg gaagttctgc actgcccttt tgcctgtcaa tgacagagaa
1261 aagatggtct gcttacctga accagtgaac ttacaagcaa gtgtgactgt ttcctgtgac
1321 ctgaagatag cctgtgtgta gtttaacctg ggcaggacac atctccctgc attttttttt
1381 ttttttttga gagagaggtg tgatgaggga tgtgtgtgtg cagcttattg tagaccatta
1441 ctactaagga gaaaagcaaa gctctttctt attttcctca taatcagcta ccctggaggg
1501 gagggagaac tcattttaca gaacttggtt tcctttgccg atcttatgta catacccatt
1561 ttagctttcc catgcatact taactgcact tgctttatct ccttgggcat tcttacttag
1621 gattcaatag aaacatgtac agggtaaaca attttttaaa aataaaactt catggagtat
1681 ctgaaaaaaa aaaaaaaaaa a
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