LOCUS BC047700 2335 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acyl-Coenzyme A oxidase 2, branched chain, mRNA (cDNA
clone MGC:51950 IMAGE:5759226), complete cds.
ACCESSION BC047700
VERSION BC047700.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2335)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2335)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51558754.
FEATURES Location/Qualifiers
source 1..2335
/db_xref="H-InvDB:HIT000053210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51950 IMAGE:5759226"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2335
/gene="ACOX2"
/gene_synonym="BCOX"
/gene_synonym="BRCACOX"
/gene_synonym="BRCOX"
/gene_synonym="THCCox"
/db_xref="GeneID:8309"
/db_xref="HGNC:HGNC:120"
/db_xref="MIM:601641"
CDS 155..2200
/gene="ACOX2"
/gene_synonym="BCOX"
/gene_synonym="BRCACOX"
/gene_synonym="BRCOX"
/gene_synonym="THCCox"
/codon_start=1
/product="acyl-Coenzyme A oxidase 2, branched chain"
/protein_id="AAH47700.1"
/db_xref="GeneID:8309"
/db_xref="HGNC:HGNC:120"
/db_xref="MIM:601641"
/translation="MGSPVHRVSLGDTWSRQMHPDIESERYMQSFDVERLTNILDGGA
QNTALRRKVESIIHSYPEFSCKDNYFMTQNERYKAAMRRAFHIRLIARRLGWLEDGRE
LGYAYRALSGDVALNIHRVFVRALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGT
YLQGLETEATYDAATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQLICSGARRGMH
AFIVPIRSLQDHTPLPGIIIGDIGPKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLP
DGTYVKLGTAQSNYLPMVVVRVELLSGEILPILQKACVIAMRYSVIRRQSRLRPSDPE
AKVLDYQTQQQKLFPQLAISYAFHFLAVSLLEFFQHSYTAILNQDFSFLPELHALSTG
MKAMMSEFCTQGAEMCRRACGGHGYSKLSGLPSLVTKLSASCTYEGENTVLYLQVARF
LVKSYLQTQMSPGSTPQRSLSPSVAYLTAPDLARCPAQRAADFLCPELYTTAWAHVAV
RLIKDSVQHLQTLTQSGADQHEAWNQTTVIHLQAAKVHCYYVTVKGFTEALEKLENEP
AIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGAQVDMARTAYLDLLRLIRKDAILLT
DAFDFTDQCLNSALGCYDGNVYERLFQWAQKSPTNTQENPAYEEYIRPLLQSWRSKL"
BASE COUNT 615 a 647 c 597 g 476 t
ORIGIN
1 ggcctacagc cggggagagg ccagcccggc ctacagtgcg gacacaggac agaggggagc
61 caggttcttt gcactgacca atgctgagag cagaccctcg gagcagccgg gttggaagtg
121 tctctccaca gtcaccagac agatccagga taggatgggc agcccagtgc accgagtgtc
181 attgggggat acctggagca ggcaaatgca ccccgacata gagagcgaga ggtatatgca
241 gtcctttgac gtggaacggc tcaccaacat ccttgatgga ggtgcccaga acactgcact
301 ccgcaggaaa gttgagagca tcatccacag ttacccggag tttagctgta aggacaatta
361 tttcatgacc cagaatgagc gttataaggc tgccatgcgg agggcattcc acatccggtt
421 gatagctcgg cgcctgggtt ggttagaaga tggtcgtgaa ttaggctacg cttacagagc
481 cctttctgga gacgtggcct taaatataca cagagtcttc gtgagagccc tcaggagcct
541 gggctcagag gagcagattg ccaaatggga cccactctgc aaaaacatcc agatcatcgc
601 aacgtatgca cagacagagt tgggacatgg gacatatctt cagggcctgg agactgaagc
661 cacctatgac gcagccaccc aggagtttgt gatacacagc cccacgctga ctgccaccaa
721 atggtggcct ggagacttgg gacggtcagc cacccatgcc ctggtccagg cccagctgat
781 ctgctcagga gccaggcggg gcatgcacgc ttttattgtg ccaatccgga gtcttcagga
841 ccacacccca ctgccaggaa tcatcattgg ggacatcgga cccaagatgg actttgatca
901 aacagacaat ggcttcctgc agctgaacca tgtgcgggtc cccagggaga acatgctgag
961 tcgctttgca caggtcttgc cagatggcac ctacgtcaaa ctcggtacag cacagagcaa
1021 ctaccttccc atggtggtgg tgcgggtgga gctgctgtca ggggagatcc tccctatact
1081 gcagaaggcc tgtgtcatcg ccatgcgcta ctcggtcatc cgccgccaat cccggctccg
1141 gcccagtgac ccagaggcaa aggtcctgga ctaccagaca caacagcaga aactctttcc
1201 tcagctggcc atcagttatg ccttccattt cctggcagtc agcctcttgg agttcttcca
1261 gcactcctac actgccattc tgaaccaaga cttcagcttc ctgcctgagc tccacgcact
1321 gagcacgggc atgaaggcca tgatgtcaga attctgcacc cagggagctg agatgtgccg
1381 cagggcctgt ggcggacatg gctactcaaa gctgagtggc ctgccatcac tggtcaccaa
1441 attgtcggcc tcctgtacct acgagggtga gaacacagtg ctctacctgc aggtggccag
1501 gttcctggtg aagagctacc tgcagactca gatgtcccct ggctccacgc cacagagatc
1561 tctctctcca tctgtcgcat atctcaccgc acctgacctg gccaggtgtc cagcccagag
1621 ggcagccgac ttcctctgcc cggagctcta caccacggcc tgggcacatg tggcagtaag
1681 gctcataaag gactcagtgc agcatttaca gaccctgacg caatccggag ctgaccagca
1741 cgaggcttgg aaccagacca ctgtcataca cctccaggct gctaaggtgc actgctacta
1801 tgtcactgtg aagggtttta cagaagctct ggagaaacta gaaaatgaac cagcgattca
1861 gcaggtgctc aagcgcctct gtgacctcca tgccatacat ggaatcttga ctaactcggg
1921 tgactttctc catgacgcct tcctgtctgg tgcccaagtg gacatggcaa gaacagccta
1981 cctggacctg ctccgcctga tccggaagga tgccatcctg ttaactgatg cttttgactt
2041 caccgatcag tgtttaaatt cagcacttgg ctgttatgat ggaaacgtct acgaacgcct
2101 gttccagtgg gctcagaagt caccaaccaa tactcaggag aaccctgcct atgaggaata
2161 tataagacca cttttacaaa gttggagatc caagctatga aataaccaac agtattcaag
2221 aagcaaccag caccatcatg tgataatggt actatggcat atatgcaaca ttaaaatttt
2281 aaattagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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